| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02934 |
|---|
| Symbol | |
|---|
| ID | 5554915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2958057 |
|---|
| End bp | 2959517 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640908416 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001446114 |
|---|
| Protein GI | 156975207 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAATA AAAGGCGATT TAGCCTCAAG TTTGTCATCT TCTTCCCACT CTTTTTATTC
TGTGTTGTCA TGCTGGTGAC TGCAAAGAAC TACTACGATG CGATGAATCG TTACATCACG
CTAGAGTACT CTCAAGTTGA CCGTGCGATC GATCGCGCAA TCAAAGTATT GACCGCGTTG
GACTACAGCT TTGTTAACTA CTCGAATCCC GCGCACCCGC TATTTAAAGA GCATAACCAT
ATGGAAAAAA ATGGCTTATG TTACGTGTGG CCGATAGATG TTCTGCTATT AGAGAGCAAA
CACTCAGGTG GGTTACCTGC AGTGGAGTTG GATTACATGA TCGTGGGACA AAAATCGCTT
TGCCAACCTG GCACTAAGCT GTTTAAGTTG GCAGAAAAAA AAGCTGGCTT TGCACCATCT
CTCTCTTTCC TTCATGACAT TGAATCCCAT ATCGTTGCGA TTCATTACAT TGATCAACGA
GGCTACATCA TCTCCTCGCC AGATACCTAT GCTCAATATT TCTCTCAACA GCTGTGGGAG
ACGCTAAAGG CGAGACCATT CTGGCAAAAA ACAGCTCAAG AGACGATGAA AGTGACCATG
TCAGGCCCTG CGCCTATGTT AGACAGACAT GATGGACAAG TCGTAAGTTT GACCGTGCCC
ATTTATGAAA AAGATGAGCA CCAAGGCGTG TTATCGATTG ATTTCGATGT TGATGGGTTA
TTAAAAGCAA ATGAAAACTT GGCAGGTAAG CTACACATTA TTTCTACTGT AATGGATGTT
CCTGACAATG CAATGCGTTT AAAGCCTATA GAGCATGAGC GCCTGAGTGC TAATCACCGT
ATTTTCTACC AATACGACCT TTGGAGTGAA TGGAAGAATC TATTGGCGTT CGAGAAGTAC
AGCGTCGCGG TGGCTTTCTT TATTTATGTT TTGAGCACCG TGGCATTATT CCTAGTCAAC
ACTCAAACAG AGCGTCGTTA TTTCAAAGAG TTGGCGGCGA AAGACCCAAT GACTGGGTTA
TTGAATCGAC GTGGCATACA GGCTGTATGG CGCAATAAGA TGACTAAAAA ACACGTCGCG
CTGGCGGTAT TCGATATTGA TGACTTTAAA TCAATCAATG ACACCCATGG ACATGATGTG
GGGGATGATG CGATTCGTTT GGTGGCAAAC TGCATCCGAG ACAATATTCG TCATTCAGAT
GCCGCATCAC GCTTCGGTGG TGAAGAATTT GTACTTGCTA TCTACGACGA AGATTTTGAA
AGTATGCTTC GAATTTTAGA ACGAGTAAGA AAGGCGATCG CTAAGAGTTC ACGCAAGGTG
GTTGCTGGTG GTTTTACCGT TTCTGGTGGG GTGGAGTTTA AGTCTGCTGC TCAACTGGAA
AGCTTTGATG AGCTATTTAA GCTTGCCGAT GAGAAGCTTT ATGAAGCGAA AAGTACGGGC
AAAAACAAAA TTTGTCACTA G
|
|---|
| Protein sequence | MGNKRRFSLK FVIFFPLFLF CVVMLVTAKN YYDAMNRYIT LEYSQVDRAI DRAIKVLTAL
DYSFVNYSNP AHPLFKEHNH MEKNGLCYVW PIDVLLLESK HSGGLPAVEL DYMIVGQKSL
CQPGTKLFKL AEKKAGFAPS LSFLHDIESH IVAIHYIDQR GYIISSPDTY AQYFSQQLWE
TLKARPFWQK TAQETMKVTM SGPAPMLDRH DGQVVSLTVP IYEKDEHQGV LSIDFDVDGL
LKANENLAGK LHIISTVMDV PDNAMRLKPI EHERLSANHR IFYQYDLWSE WKNLLAFEKY
SVAVAFFIYV LSTVALFLVN TQTERRYFKE LAAKDPMTGL LNRRGIQAVW RNKMTKKHVA
LAVFDIDDFK SINDTHGHDV GDDAIRLVAN CIRDNIRHSD AASRFGGEEF VLAIYDEDFE
SMLRILERVR KAIAKSSRKV VAGGFTVSGG VEFKSAAQLE SFDELFKLAD EKLYEAKSTG
KNKICH
|
|---|
| |