Gene VIBHAR_02933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02933 
Symbol 
ID5554951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2957009 
End bp2957968 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content47% 
IMG OID640908415 
Producthypothetical protein 
Protein accessionYP_001446113 
Protein GI156975206 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGTTG TATTAGGCCC GATGGAAGGC GTTTTGGACC ATTTAATGCG CCAAATCCTG 
ACCGAGATAA ACGACTATGA TCTGTGTGTG ACAGAGTTTG TTCGAGTCAT CGATCAGCTA
TTACCTGATC ACGTATTCCA TCGTTTGTGT CCTGAGCTGC TTCAAGGCTC ACAGACCGCA
TCTGGCGTGC CTGTTCATGT TCAATTGCTT GGCCAAGAGC CGAATTGGAT GGCAGAAAAC
GCAGTCAAAG CAGCGGAACT GGGCGCTCGT GGTATTGATC TTAACTTTGG TTGTCCGGCA
AAACTGGTAA ACAAAAGTAA AGGTGGCGCT GCGCTTCTTC AGCATCCAGA GTTCATTCAC
AACATCGTAA AAGCATGTCG TGATGCCGTA CCAAGCAATA TTCCTGTCAC TGCGAAAATT
CGTCTCGGTT GGGAAAATCC TGAAGACTGC TTCGAGATTG TAGATGCGAT TCAATCTGCT
GGAGCAAATG AGCTGACGGT TCACGCTCGA ACAAAGCAAG GTGGTTACAA AGCCTCGGAA
ATCAAATGGG AATACATTAC CCAGATCCGT GATCGTTTTT CTATCCCGCT CATCGCTAAT
GGCGAGATTT GGAACTACGA AGATGGCCAA CGCTGCATTG AGACCACAGG AGTGGATTCT
CTGATGGTAT GTCGTGGCGC ATTCAATATT CCAAACTTGG GTAACATGGT GAAACACAAC
CAGCAACCAA TGGCTTGGCC AGAAGTTGTC GAGCTGCTGA TCTATTACTC TCAGTTTGAA
ATGAAAGGCG ATAAAGGTTT GTATTATCCG AACCGCGTTA AGCAATGGTT TTCTTACCTA
CGCCAAGCCT ACCCTGAAGC AAATGAGTTG TTTCGCGAAA TTCGTACATT CAATAAGGCA
GCACCGATCG TTGAGCACAT TCAACGTTAC CGCGACGAGC TGCTATCTCG CGTCGCATAG
 
Protein sequence
MRVVLGPMEG VLDHLMRQIL TEINDYDLCV TEFVRVIDQL LPDHVFHRLC PELLQGSQTA 
SGVPVHVQLL GQEPNWMAEN AVKAAELGAR GIDLNFGCPA KLVNKSKGGA ALLQHPEFIH
NIVKACRDAV PSNIPVTAKI RLGWENPEDC FEIVDAIQSA GANELTVHAR TKQGGYKASE
IKWEYITQIR DRFSIPLIAN GEIWNYEDGQ RCIETTGVDS LMVCRGAFNI PNLGNMVKHN
QQPMAWPEVV ELLIYYSQFE MKGDKGLYYP NRVKQWFSYL RQAYPEANEL FREIRTFNKA
APIVEHIQRY RDELLSRVA