Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02933 |
Symbol | |
ID | 5554951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 2957009 |
End bp | 2957968 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640908415 |
Product | hypothetical protein |
Protein accession | YP_001446113 |
Protein GI | 156975206 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAGTTG TATTAGGCCC GATGGAAGGC GTTTTGGACC ATTTAATGCG CCAAATCCTG ACCGAGATAA ACGACTATGA TCTGTGTGTG ACAGAGTTTG TTCGAGTCAT CGATCAGCTA TTACCTGATC ACGTATTCCA TCGTTTGTGT CCTGAGCTGC TTCAAGGCTC ACAGACCGCA TCTGGCGTGC CTGTTCATGT TCAATTGCTT GGCCAAGAGC CGAATTGGAT GGCAGAAAAC GCAGTCAAAG CAGCGGAACT GGGCGCTCGT GGTATTGATC TTAACTTTGG TTGTCCGGCA AAACTGGTAA ACAAAAGTAA AGGTGGCGCT GCGCTTCTTC AGCATCCAGA GTTCATTCAC AACATCGTAA AAGCATGTCG TGATGCCGTA CCAAGCAATA TTCCTGTCAC TGCGAAAATT CGTCTCGGTT GGGAAAATCC TGAAGACTGC TTCGAGATTG TAGATGCGAT TCAATCTGCT GGAGCAAATG AGCTGACGGT TCACGCTCGA ACAAAGCAAG GTGGTTACAA AGCCTCGGAA ATCAAATGGG AATACATTAC CCAGATCCGT GATCGTTTTT CTATCCCGCT CATCGCTAAT GGCGAGATTT GGAACTACGA AGATGGCCAA CGCTGCATTG AGACCACAGG AGTGGATTCT CTGATGGTAT GTCGTGGCGC ATTCAATATT CCAAACTTGG GTAACATGGT GAAACACAAC CAGCAACCAA TGGCTTGGCC AGAAGTTGTC GAGCTGCTGA TCTATTACTC TCAGTTTGAA ATGAAAGGCG ATAAAGGTTT GTATTATCCG AACCGCGTTA AGCAATGGTT TTCTTACCTA CGCCAAGCCT ACCCTGAAGC AAATGAGTTG TTTCGCGAAA TTCGTACATT CAATAAGGCA GCACCGATCG TTGAGCACAT TCAACGTTAC CGCGACGAGC TGCTATCTCG CGTCGCATAG
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Protein sequence | MRVVLGPMEG VLDHLMRQIL TEINDYDLCV TEFVRVIDQL LPDHVFHRLC PELLQGSQTA SGVPVHVQLL GQEPNWMAEN AVKAAELGAR GIDLNFGCPA KLVNKSKGGA ALLQHPEFIH NIVKACRDAV PSNIPVTAKI RLGWENPEDC FEIVDAIQSA GANELTVHAR TKQGGYKASE IKWEYITQIR DRFSIPLIAN GEIWNYEDGQ RCIETTGVDS LMVCRGAFNI PNLGNMVKHN QQPMAWPEVV ELLIYYSQFE MKGDKGLYYP NRVKQWFSYL RQAYPEANEL FREIRTFNKA APIVEHIQRY RDELLSRVA
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