| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02930 |
|---|
| Symbol | nhaB |
|---|
| ID | 5555000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 2953679 |
|---|
| End bp | 2955265 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640908412 |
|---|
| Product | sodium/proton antiporter |
|---|
| Protein accession | YP_001446110 |
|---|
| Protein GI | 156975203 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3067] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGT CGCTCGGAAA TGCCTTTATC AAGAACTTTC TTGGTAAAGC GCCTGATTGG
TACAAAGTTG CCATTATAGC CTTCCTAATT ATTAACCCGA TTGTTTTCTT CCTAATTGAC
CCATTTGTTG CAGGTTGGTT GCTAGTAGCA GAATTTATTT TCACGCTAGC AATGGCGCTG
AAGTGTTACC CACTTCAACC AGGCGGTTTG CTTGCAATTG AAGCGGTTGC TATCGGGATG
ACCAGCCCTG CCCAGGTGAA GCATGAGCTG GTTGCGAATA TCGAAGTTCT TCTACTATTG
GTATTCATGG TTGCAGGTAT CTACTTTATG AAACAGCTTC TGCTGTTCAT TTTTACGAAG
ATCCTGCTTG GTATTCGTTC GAAAACGTTA CTTTCACTCG CATTCTGTTT CGCAGCTGCG
TTTTTGTCAG CATTTCTCGA TGCACTGACC GTTATCGCCG TCGTAATCAG CGTTGCAGTG
GGTTTCTACT CGATTTACCA CAAAGTCGCT TCTGGTAACC CTATCGGTGA CCATGACCAT
ACTCAAGATG ACACCATCAC TGAGCTTACG CGTGACGACC TTGAGAACTA CCGTGCATTC
CTACGTTCAT TGCTAATGCA TGCTGGTGTG GGTACTGCGC TTGGTGGTGT AACAACAATG
GTTGGTGAAC CACAAAACTT GATCATTGCA GACCAAGCGG GTTGGTTCTT TGGTGAATTC
CTGATCCGAA TGGCGCCAGT GACTCTTCCT GTTTTCTTCT GCGGCTTGAT CACTTGTGCA
ATAGTAGAGA AGCTAAAGAT TTGTGGGTAC GGTGCGCAGC TGCCTGATAA CGTTCGTCAA
ATCCTTGTCG ATTTCGACCG TGAAGAGCGT AAAACCCGTA CTAACCAAGA CGTAGCTAAG
CTTTGGATTC AAGGTCTAAT CGCAGTTTGG TTAATTGCAG CACTTGCTCT GCACTTAGCG
GCCGTGGGCC TGATTGGTCT TTCAGTTATT ATCCTTGCAA CCTCATTCAC TGGTGTGATT
GAAGAACATT CAATGGGTAA AGCGTTTGAA GAAGCCCTGC CGTTTACAGC ACTTCTTGCC
GTGTTCTTTG CAGTCGTTGC TGTAATCATT GACCAAGAAC TATTTAAGCC GGTTATCGAC
GCTGTACTTG CAGTTGAAGA CAAAAGCACA CAGCTGGCGT TGTTCTATGT CGCCAACGGT
CTGCTTTCAA TGGTCTCGGA TAACGTTTTC GTGGGTACGG TCTACATTAA CGAAGTAAAA
GCGGCACTGA TTGATGGCCA AATTACTCGT GAACAGTTCG ACCTATTAGC GGTAGCAATC
AACACAGGAA CTAACCTACC TTCAGTTGCA ACGCCAAACG GCCAAGCTGC GTTCCTATTC
CTGCTAACAT CCGCACTGGC ACCATTGATT CGTCTATCCT ACGGTCGCAT GGTGATCATG
GCACTGCCAT ACACTATCGT ACTGGCAATT GTTGGCTTGA TGGGCATCAT GTTCTTCCTA
GAACCAGCAA CCGCATTCTT CTACGATGCA GGCTGGATTT CGCCAAGCAG TGGTGATCTG
GCTCCTGTTG TGTCAGGTGG ACACTAA
|
|---|
| Protein sequence | MPMSLGNAFI KNFLGKAPDW YKVAIIAFLI INPIVFFLID PFVAGWLLVA EFIFTLAMAL
KCYPLQPGGL LAIEAVAIGM TSPAQVKHEL VANIEVLLLL VFMVAGIYFM KQLLLFIFTK
ILLGIRSKTL LSLAFCFAAA FLSAFLDALT VIAVVISVAV GFYSIYHKVA SGNPIGDHDH
TQDDTITELT RDDLENYRAF LRSLLMHAGV GTALGGVTTM VGEPQNLIIA DQAGWFFGEF
LIRMAPVTLP VFFCGLITCA IVEKLKICGY GAQLPDNVRQ ILVDFDREER KTRTNQDVAK
LWIQGLIAVW LIAALALHLA AVGLIGLSVI ILATSFTGVI EEHSMGKAFE EALPFTALLA
VFFAVVAVII DQELFKPVID AVLAVEDKST QLALFYVANG LLSMVSDNVF VGTVYINEVK
AALIDGQITR EQFDLLAVAI NTGTNLPSVA TPNGQAAFLF LLTSALAPLI RLSYGRMVIM
ALPYTIVLAI VGLMGIMFFL EPATAFFYDA GWISPSSGDL APVVSGGH
|
|---|
| |