| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02879 |
|---|
| Symbol | |
|---|
| ID | 5554351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2898999 |
|---|
| End bp | 2900648 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640908361 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001446059 |
|---|
| Protein GI | 156975152 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2272] Carboxylesterase type B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA CACTTTATAT CTCGATTACC AGCTCGCTTT TGGCTCTTAG TTCTTCAGCA
ATTGCTTCGC CACTGGCGGA AATTGACGGT GCAACGCTTC AGGGCCTCAT CAATTCACCG
GCTGATTATT CTGCACAAGT TGATGCATTT CTTGGCGTAA AATACGCTTC TGCTGAGCGA
TTTAGTGCAC CACAGCGTCA TCACTTTATT ACTGGCGAGC ACTATGATGC GACGGTTACG
GGAGATATTT GTCCACAAGT GCCGCATACC ATGGAAGCTA ATGGTGTTGT ACAAGAAGCA
CAAAGCGAAG ATTGTTTGAA TGCAAACATC TGGCGTCCAT CTGACATTGC TAACGATGAA
AAGCTGCCTG TTTATGTGTT CATTCACGGT GGCGCATTTG AGCTAGGTTC TAGCACCGTT
GAGCAGTTTG ATGGTGCTAA ACTGGTTGCA AAAAACGCTG ATGAAGGAAA TCCATTTATT
CTCGTCAGCA TTAACTATCG TCTTGGCATT CTTGGTAGTT TCTACAGCAG CGAGCACTCG
GGTAACTATG GCATCCAAGA CCAAAAATCA GCGTTAAGTT GGATTCATGA CAACATTGGT
AACTTTGGTG GTGATGCTGA GAATATTACT TTGTTTGGCG AAAGCGCTGG TGCGATGTCA
ATCGGCATTC AGTTAATGGA TGAGAAACAA AATGCGCACC TATATCAACG CGCTATTATG
GAAAGCAACC CATATGGTGT GAAATACAAA GATGCCAAAT CGGCGCAATG GTTAGCTGAG
CAGGTAAAAG ACAAACTCAG TAATGATCAA GATATTCAAA CTGTACCTTT TGAAGAGATC
ATCAATATAC AGTCTCAAAT GAAGGCGGCG ACAACGCAAA TGAATAACTT GATGACAATT
ACGCCAAGTA CATCTGGCCT GTTGGCCTGG GCGCCGTATG TCGATGGAGA GACCATCCCA
TATCAGCCGA TTGACCTACA AAAAGTAGAT GGGGTAGATG TGACTCTAGG CTTTAACAAA
GATGAATCCA ACATCTTTGT CGCTCCTTTC GATGTGATAC TCAACGCGCC TGGTAGCTAT
AATCTTTTGG TTGATGCATT CTTTGGTTCA GACAAAGGAG AGCAGTTGCG CAATTTGCCT
GCATTCCACT TAAACTGGTG GAACAGCACG CCTGAAAAGC GAAAAAACAA CGCCCGAAAA
TTGATGAATC AAGTTTTATT CATGTGTTCA TCCCAACATG TTGCGCAAAA CTTGTCGTCA
AACCAAACAA CAACCTCGCT GTACCAATTT AACTATCAAC CAGACTTTGC CTTATGGCCG
GATTACTACG TGGAGAGCTT TACAAAAACA TGCTCACCGT CAGAAACATC TTGTCATGGT
GCTGAACTGT CTTTCATCTT CGGAAATGAG GTGAACGCAG TATCTGGCCC TACCGTTTTT
TCTGAAAAGG ATCACCAAGC GAAAGACGTT CTTATGTCCA ACTGGCTGAA GTCGAAGACA
TTCGAACCAT ATTCGCAAGA GACAGACAAT ATTACTGTAT TTAACGAAGA AGCTTACTTT
AATGTAAGTG GTGATTGGGA TAATACGAAA AATGGTAATG TGTGTTCTCA AGTTAATGAA
ATAATGAACA GTAATACTAA GCTTTACTAA
|
|---|
| Protein sequence | MKNTLYISIT SSLLALSSSA IASPLAEIDG ATLQGLINSP ADYSAQVDAF LGVKYASAER
FSAPQRHHFI TGEHYDATVT GDICPQVPHT MEANGVVQEA QSEDCLNANI WRPSDIANDE
KLPVYVFIHG GAFELGSSTV EQFDGAKLVA KNADEGNPFI LVSINYRLGI LGSFYSSEHS
GNYGIQDQKS ALSWIHDNIG NFGGDAENIT LFGESAGAMS IGIQLMDEKQ NAHLYQRAIM
ESNPYGVKYK DAKSAQWLAE QVKDKLSNDQ DIQTVPFEEI INIQSQMKAA TTQMNNLMTI
TPSTSGLLAW APYVDGETIP YQPIDLQKVD GVDVTLGFNK DESNIFVAPF DVILNAPGSY
NLLVDAFFGS DKGEQLRNLP AFHLNWWNST PEKRKNNARK LMNQVLFMCS SQHVAQNLSS
NQTTTSLYQF NYQPDFALWP DYYVESFTKT CSPSETSCHG AELSFIFGNE VNAVSGPTVF
SEKDHQAKDV LMSNWLKSKT FEPYSQETDN ITVFNEEAYF NVSGDWDNTK NGNVCSQVNE
IMNSNTKLY
|
|---|
| |