Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02870 |
Symbol | |
ID | 5553834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 2890968 |
End bp | 2892272 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640908352 |
Product | hypothetical protein |
Protein accession | YP_001446050 |
Protein GI | 156975143 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGTCA CGGGGATTTA TCAATTCACT TCACAATTAC TTCGCAAAGT AAAAAAATTA TCCCGTAATA AAATTTCGGA GTGCAAGATG TACATGGCTC AACCGGGCCA TATTGATCAT ATCAAACAGG TCAATGCTGG TCGTGTATAC AAACTAATTG ACCTCAAGGG TCCAATATCT CGAATCGATT TGTCCAAGCA AAGTGAGCTT GCGCCTGCGA GTATCACTAA GATCACTCGA GAGTTGATTG AAGCCCATTT GATTCATGAA ACAACCGTTC AGGAAGCCAC CAGTCGTGGT CGTCCAGCGG TGGGTTTGCA GGTCAATAAT GAAGGTTGGC AATTCTTATC GATGCGTTTA GGTCGCGGCT ACTTGACCAT CGCTCTTCAT GAGCTTGGCG GTGACGTTCT GATTGATACC AAAATCGATA TCCACGAGCG CGATCAAGAT GATGTTTTGG AACGCTTACT CTACGAAATT GATGAATTCT TCCAAACCTA CGCCGATCAA CTTGACCGTG TAACCAGTAT CGCCATTACG TTACCTGGTC TGGTGAACTC AGAGCAGGGC ATTGTATTGC AGATGCCACA TTACAATGTT GAGAATTTAG CGCTAGGTCC TGAGATCTAT AAAGCAACAG GCTTACCTGT TTTTATTGCT AACGATACAC GAGCTTGGGC GTTGGCTGAG AAACTGTTTG GTCATTCTCA AGATAACGAT AACTCGGTTC TTATCTCCAT CCACCACGGC TTAGGCGCTG GTATTATCTT GGACGGTCGA GTGCTGCAAG GCCGACACGG TAACATTGGT GAATTGGGGC ATATCCAAAT TGACCCGAAC GGCAAGCGCT GCCACTGTGG CAATATTGGT TGTTTGGAAA CTGTGGCCAG TTCACAGGCG ATCCGTGAAG AAGTGGTCAC TCGCATTGCA AATGGCGAAG CTTCTATCCT TGCAGAGCAA GAAGAGATGA GTATCGAGAG CATTTGTGAA GCTGCTGCGA ACGGCGACCC TCTTGCGGTT GACGTGATTG AGAAACTGGG TCGCTATTTA GGCTCGGCTA TTGCAATAGT CATTAACTTG TTCAACCCAG AAAAAATTCT CATCGGTGGG GTTATCAACC AAGCGAAGGA TGTGCTTTAT CCAGCCGTTC GACGTTGTAT AGAAGAGCAA AGTCTTACAG TTTACCATCA AGATCTTGAG CTGGTGGAAT CTCGTTTCTA CAAACAAGCG ACTATGCCCG GAGCCGCATT GATTAAGCAA GCGCTGTACG ATGGTCAGCT GCTGATGAAG GTGATTGAAG GCTAA
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Protein sequence | MLVTGIYQFT SQLLRKVKKL SRNKISECKM YMAQPGHIDH IKQVNAGRVY KLIDLKGPIS RIDLSKQSEL APASITKITR ELIEAHLIHE TTVQEATSRG RPAVGLQVNN EGWQFLSMRL GRGYLTIALH ELGGDVLIDT KIDIHERDQD DVLERLLYEI DEFFQTYADQ LDRVTSIAIT LPGLVNSEQG IVLQMPHYNV ENLALGPEIY KATGLPVFIA NDTRAWALAE KLFGHSQDND NSVLISIHHG LGAGIILDGR VLQGRHGNIG ELGHIQIDPN GKRCHCGNIG CLETVASSQA IREEVVTRIA NGEASILAEQ EEMSIESICE AAANGDPLAV DVIEKLGRYL GSAIAIVINL FNPEKILIGG VINQAKDVLY PAVRRCIEEQ SLTVYHQDLE LVESRFYKQA TMPGAALIKQ ALYDGQLLMK VIEG
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