| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02870 |
|---|
| Symbol | |
|---|
| ID | 5553834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2890968 |
|---|
| End bp | 2892272 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640908352 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001446050 |
|---|
| Protein GI | 156975143 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGTCA CGGGGATTTA TCAATTCACT TCACAATTAC TTCGCAAAGT AAAAAAATTA
TCCCGTAATA AAATTTCGGA GTGCAAGATG TACATGGCTC AACCGGGCCA TATTGATCAT
ATCAAACAGG TCAATGCTGG TCGTGTATAC AAACTAATTG ACCTCAAGGG TCCAATATCT
CGAATCGATT TGTCCAAGCA AAGTGAGCTT GCGCCTGCGA GTATCACTAA GATCACTCGA
GAGTTGATTG AAGCCCATTT GATTCATGAA ACAACCGTTC AGGAAGCCAC CAGTCGTGGT
CGTCCAGCGG TGGGTTTGCA GGTCAATAAT GAAGGTTGGC AATTCTTATC GATGCGTTTA
GGTCGCGGCT ACTTGACCAT CGCTCTTCAT GAGCTTGGCG GTGACGTTCT GATTGATACC
AAAATCGATA TCCACGAGCG CGATCAAGAT GATGTTTTGG AACGCTTACT CTACGAAATT
GATGAATTCT TCCAAACCTA CGCCGATCAA CTTGACCGTG TAACCAGTAT CGCCATTACG
TTACCTGGTC TGGTGAACTC AGAGCAGGGC ATTGTATTGC AGATGCCACA TTACAATGTT
GAGAATTTAG CGCTAGGTCC TGAGATCTAT AAAGCAACAG GCTTACCTGT TTTTATTGCT
AACGATACAC GAGCTTGGGC GTTGGCTGAG AAACTGTTTG GTCATTCTCA AGATAACGAT
AACTCGGTTC TTATCTCCAT CCACCACGGC TTAGGCGCTG GTATTATCTT GGACGGTCGA
GTGCTGCAAG GCCGACACGG TAACATTGGT GAATTGGGGC ATATCCAAAT TGACCCGAAC
GGCAAGCGCT GCCACTGTGG CAATATTGGT TGTTTGGAAA CTGTGGCCAG TTCACAGGCG
ATCCGTGAAG AAGTGGTCAC TCGCATTGCA AATGGCGAAG CTTCTATCCT TGCAGAGCAA
GAAGAGATGA GTATCGAGAG CATTTGTGAA GCTGCTGCGA ACGGCGACCC TCTTGCGGTT
GACGTGATTG AGAAACTGGG TCGCTATTTA GGCTCGGCTA TTGCAATAGT CATTAACTTG
TTCAACCCAG AAAAAATTCT CATCGGTGGG GTTATCAACC AAGCGAAGGA TGTGCTTTAT
CCAGCCGTTC GACGTTGTAT AGAAGAGCAA AGTCTTACAG TTTACCATCA AGATCTTGAG
CTGGTGGAAT CTCGTTTCTA CAAACAAGCG ACTATGCCCG GAGCCGCATT GATTAAGCAA
GCGCTGTACG ATGGTCAGCT GCTGATGAAG GTGATTGAAG GCTAA
|
|---|
| Protein sequence | MLVTGIYQFT SQLLRKVKKL SRNKISECKM YMAQPGHIDH IKQVNAGRVY KLIDLKGPIS
RIDLSKQSEL APASITKITR ELIEAHLIHE TTVQEATSRG RPAVGLQVNN EGWQFLSMRL
GRGYLTIALH ELGGDVLIDT KIDIHERDQD DVLERLLYEI DEFFQTYADQ LDRVTSIAIT
LPGLVNSEQG IVLQMPHYNV ENLALGPEIY KATGLPVFIA NDTRAWALAE KLFGHSQDND
NSVLISIHHG LGAGIILDGR VLQGRHGNIG ELGHIQIDPN GKRCHCGNIG CLETVASSQA
IREEVVTRIA NGEASILAEQ EEMSIESICE AAANGDPLAV DVIEKLGRYL GSAIAIVINL
FNPEKILIGG VINQAKDVLY PAVRRCIEEQ SLTVYHQDLE LVESRFYKQA TMPGAALIKQ
ALYDGQLLMK VIEG
|
|---|
| |