Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02868 |
Symbol | |
ID | 5554099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 2886623 |
End bp | 2889697 |
Gene Length | 3075 bp |
Protein Length | 1024 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640908350 |
Product | DNA polymerase III alpha chain |
Protein accession | YP_001446048 |
Protein GI | 156975141 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTACG CAGAACTGTT TTGTCAGTCC AACTTCTCCT TTCTCACCGG CGCTTCTCAT GCAGAAGAGT TGGTATTGCA GGCGGCGTTT TATCGCTATC AAGCCATTGC GATCACCGAT GAGTGCTCAG TTGCAGGCGT AGTGAAAGCC CATGCTACCA TCGAGCAGCA TAAACTCGAC ATCAAACAAA TCGTCGGCAG TATGTTTTGG CTCAATGATG AATGCCAAGT GGTACTGCTT TGCCCTTGCC GTAAAGCTTA TGCTGAGCTG TGCCGGATCA TCACCAATGC GAGACGTCGC AGCGAGAAAG GCAGTTATCA ATTGTCTGAG TGGGATTTGA TGTCGGTTCG CCATTGTTTT GTACTGTGGC TCCCAACTCA TCAAGAGAGC GACCATTATT GGGGACGCTG GCTCCAGCAG CATCACGCTC ATCGTTTATG GGTCGCGATT CAGCGTCATT TAGGTGGCGA CGACGATGCC TACACCACGC ACTGTGAGTT ACTGGCAAAC GAGTTCCAAT TGCCAATTGC CGCCTGTGGC GGCGTCTTAA TGCATGCCGT TGAGCGCTTA CCTTTGCAAC ATGTCCTGAC AGCAGTAAAG CACGGTTGCA GCGTTGATAA GCTCGGCTTT AGTCGTTTAT CCAATGCTGA GCGAGCATTG CGCCCACTGA ATAAACTGTC TCGAATTTAC AAATCTAAAT GGCTAGAAGA AAGCACCCAT ATTGCGGACT TGTGCGAATT CAAACTCTCA GATTTGAAAT ACGAATACCC AACAGAACTG ATTCCAAATG GTTACACCCC TACTTCTTAT CTGCGTATGT TGGTCGAGCG TGGTAAAAAG TTGCGCTTTC CTGAGGGCAT ACCCGCAGAT ATTCATCAAA CCATCGAGAA TGAGTTAGCG CTCATTGAAG AGCTGGAATA TCACTATTAC TTTCTCACCA TCCACGACAT CGTGATGTTT GCTAAACAGC AAGGCATTCT CTATCAAGGG CGAGGCTCAG CGGCAAACTC GGTGGTGTGT TACTGCTTAG AAATCACCGC CGTCGATCCT AGACAAATCT CGGTTCTGTT CGAACGCTTT ATTAGCCGAG AGCGAGAAGA GCCGCCAGAC ATTGACGTCG ACTTTGAACA CGAGCGCCGT GAAGAAGTCA TTCAATATAT CTACAAGAAG TACGGGCGCG AGCGTGCCGC TTTAGCAGCT ACCGTGATCA GCTATCGCTT TAAAAGCGCC GTGCGTGAGG TAGGTAAAGC GCTAGGGATT GAAGAAACGC AATTGGATTT CTTCATCAAA AACGTTAATC GACGTGATCG CACCCAAGGT TGGCAAGCGC AAATCATCGA ATTGGGGTTA CAACCAGAGT CGTTAAAGGG CCAGCAATTT ATCCAGTTGG TGAACGAGAT CACCGGCTTT CCGCGCCATT TATCTCAGCA CGTGGGCGGC TTTGTGATTT CATCAGGCCC TTTGTATGAA CTGGTGCCTG TCGAAAATGC TTCGATGGAA GATCGTACTA TTATTCAATG GGATAAAGAT GATTTAGAAA GCTTAAAGCT GTTAAAAGTC GATGTGCTGG CACTGGGCAT GTTGAATGCG ATCCGTAAAT GCTTTCAATT GGTCGAGAAG CACCACCAGC GATCCCTGTC GATTGCCGAG ATCACGCGCC TGCAAGATGA TCCGCACGTA TACCGCATGA TCCAAAAAGC CGACACCGTT GGCGTGTTTC AAATTGAGTC TCGCGCGCAA ATGAGCATGC TGCCACGCTT AAAGCCTGCA CGTTACTACG ACTTAGTCGT ACAGATTGCT ATTGCCCGTC CGGGCCCAAT CCAAGGTGAT ATGGTCCATC CGTTTTTAAA AAGGCGTAAC GGTGAAGAGC CGATCAGCTA TCCATCAGAA GAAGTGAAAA GCGTACTAGA GCGAACCATG GGCGTACCAA TTTTCCAAGA ACAAGTGATC AAACTCGCGA TGGTTGCTGC GGGGTTTAGT GGTGGAGAAG CCGATCAGCT ACGCCGTGCG ATGGCAGCAT GGAAGAAGAA CGGCGATCTT GCCAAGTTCA AACCGAAGTT AATCGACGGG ATGCGTGAAC GTGGCTATGA CTTAGAGTTT GCGGAACGCA TCTTCGATCA AATCTGCGGT TTTGGTGAAT ACGGTTTTCC AGAAAGTCAC TCAGCCTCTT TCGCAGTGCT GGCTTACTGC TCTGCATGGT TGAAGTTTTA CTACCCTGCT GAGTTCTATA CTGCCCTACT AAATAGTCAA CCGATGGGTT TTTATAGCCC TTCGCAATTG ATTCAAGATG CGCGCCGACA CGGTGTCGAA GTGTTGCCTG TTTGCATCAA TCACTCTTCG TATCAGCACC ATTTGGTTCA GCGTCCTAAT GGCCGTCTTG GTGTACAACT GGGCTTTCGT TTAGTAAAGG GCTTTAATCA AGAAAGCGCT TCTCGACTGG TTGAGCGCCG ACCAAGCACT GGCTATCGTG CTATCCAAGA GGTGAAACAG ATCTTAAGAA ACCGCCGCGA TATTGAATTA CTCGCTTCTG CCGATGCGTT TCAGATCCTT TCTGGCAATC GCTATAACGC GCGTTGGGCC GCAATGGATT CGTTGTCAGA TTTGCCTTTG TTTAATCACA TAGAAGAACC AATGGCGAAT TACCAAGCTC AACCTTCTGA ATACGAGAAT TTGATTGAAG ATTACGCCAG CACCGGATTA TCACTGAGCC GACACCCGAT TACTCTGCTG GAAGAAGCAG GCAAGTTACC ACGCTTTACT CGGATGAAGC AGTTGGTAGA AAAGGAGCAC AATTCTTTAG TGACGGTCAT CGGTGTTGTG ACAGGTAGAC AATCTCCAGG CACGGCAGCA GGTGTGACCT TTTTCACTTT AGAAGATGAT ACGGGCAACA TTAATGTGGT GGTCTGGCGA GCAACCGCGC GCGCCCAAAA GCAAGCTTAT CTCACTTCGA AAGTCTTGAT GGTCAAAGGG ATTTTAGAAA GAGAAGGAGA AGTGACGCAT GTAATTGCAG GAAAGCTCAT CGATTGCACA CACAACCTTG CTGAGCTAAA AAGTAAATCT CGTGACTTCC ATTAA
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Protein sequence | MSYAELFCQS NFSFLTGASH AEELVLQAAF YRYQAIAITD ECSVAGVVKA HATIEQHKLD IKQIVGSMFW LNDECQVVLL CPCRKAYAEL CRIITNARRR SEKGSYQLSE WDLMSVRHCF VLWLPTHQES DHYWGRWLQQ HHAHRLWVAI QRHLGGDDDA YTTHCELLAN EFQLPIAACG GVLMHAVERL PLQHVLTAVK HGCSVDKLGF SRLSNAERAL RPLNKLSRIY KSKWLEESTH IADLCEFKLS DLKYEYPTEL IPNGYTPTSY LRMLVERGKK LRFPEGIPAD IHQTIENELA LIEELEYHYY FLTIHDIVMF AKQQGILYQG RGSAANSVVC YCLEITAVDP RQISVLFERF ISREREEPPD IDVDFEHERR EEVIQYIYKK YGRERAALAA TVISYRFKSA VREVGKALGI EETQLDFFIK NVNRRDRTQG WQAQIIELGL QPESLKGQQF IQLVNEITGF PRHLSQHVGG FVISSGPLYE LVPVENASME DRTIIQWDKD DLESLKLLKV DVLALGMLNA IRKCFQLVEK HHQRSLSIAE ITRLQDDPHV YRMIQKADTV GVFQIESRAQ MSMLPRLKPA RYYDLVVQIA IARPGPIQGD MVHPFLKRRN GEEPISYPSE EVKSVLERTM GVPIFQEQVI KLAMVAAGFS GGEADQLRRA MAAWKKNGDL AKFKPKLIDG MRERGYDLEF AERIFDQICG FGEYGFPESH SASFAVLAYC SAWLKFYYPA EFYTALLNSQ PMGFYSPSQL IQDARRHGVE VLPVCINHSS YQHHLVQRPN GRLGVQLGFR LVKGFNQESA SRLVERRPST GYRAIQEVKQ ILRNRRDIEL LASADAFQIL SGNRYNARWA AMDSLSDLPL FNHIEEPMAN YQAQPSEYEN LIEDYASTGL SLSRHPITLL EEAGKLPRFT RMKQLVEKEH NSLVTVIGVV TGRQSPGTAA GVTFFTLEDD TGNINVVVWR ATARAQKQAY LTSKVLMVKG ILEREGEVTH VIAGKLIDCT HNLAELKSKS RDFH
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