| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02865 |
|---|
| Symbol | |
|---|
| ID | 5556091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 2883617 |
|---|
| End bp | 2884363 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640908347 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001446045 |
|---|
| Protein GI | 156975138 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACTACT CCGTTTCAGC AGATGCCCTA AAAGGTAAAG TCATTCTTGT CACTGGTGCA
GGTAATGGCA TCGGTCGCCA AGCCGCACTT TCTTACGCTC AGCACGGTGC GACTGTGATT
CTACTTGGTC GAAACGTTCA GAACCTTGAA TCCATTTACG ATGAAATCGA ATCTGCGGGC
TACCCTCAGC CAGCGATCAT CCCACTTGAC CTGAAAGGTG CAACAAAGCA GCACTACATC
GATATGGCAG AAACCATCGA AGGTCAATTT GGTCGCTTGG ATGGCCTATT GCACAACGCC
GGCGTTCTCA GCACGCTATG TCCGTTTGAG CAAATCAACG AAGAAGACTT CGACGACATC
ATGCAAATCA ACGTGAAAGC CGAAGTGCTG ATAACTCAAG CTCTGCTACC TATCATGCGT
AAGTCAGATG CGGGTCGTAT TGTCTTTACC TCTTCGACAG TTGGTCATTC TGGTCGTGCT
TTCTGGGGCC CATACGCCAT TTCTAAGTTT GCCGTAGAAG GTATGATGCA GGTATTGGCA
GATGAGCTAA GTGACACACC AATGCGTGTT AACGCGATTA ACCCAGGTGC AACTCGTACT
CGAATGCGTG AAAAAGCCTA CCCAGGTGAA GATGCGAACA CACTAAAAAC AGCACTGGAC
ATCATGCCGC TTTACTTGCA CTTGATGGAC CCAGCAGTGA CTGATGTAAA TGGTCAGTGT
ATCGACGCGC AGCCAAAGCG TAAGTAA
|
|---|
| Protein sequence | MNYSVSADAL KGKVILVTGA GNGIGRQAAL SYAQHGATVI LLGRNVQNLE SIYDEIESAG
YPQPAIIPLD LKGATKQHYI DMAETIEGQF GRLDGLLHNA GVLSTLCPFE QINEEDFDDI
MQINVKAEVL ITQALLPIMR KSDAGRIVFT SSTVGHSGRA FWGPYAISKF AVEGMMQVLA
DELSDTPMRV NAINPGATRT RMREKAYPGE DANTLKTALD IMPLYLHLMD PAVTDVNGQC
IDAQPKRK
|
|---|
| |