| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02860 |
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| Symbol | rpsA |
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| ID | 5555054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 2879605 |
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| End bp | 2881275 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640908342 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001446040 |
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| Protein GI | 156975133 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT CTTTTGCTCA ACTCTTTGAA GAGTTTCTAA ACGAAACAGA ATTCCAACAA
GGCAGCATCG TTAAAGGTAC TGTAGTAGCT ATCGAGAACG GTTTCGTTCT TGTTGACGCT
GGTCTTAAGT CTGAATCTGC TATCCCTGCT GAACAGTTCA AGAACGCTGC TGGCGAACTT
GAAGTTGAAG TTGGCGCTGA AGTAGACGTA GCTCTAGACG CTGTTGAAGA TGGTTTCGGT
GAAACTCAAC TTTCTCGTGA GAAAGCTAAG CGTCACGAAG CTTGGATCGT TCTTGAGAAA
GCTTACGAAG AAGCTGAAAC TGTTGTTGGT ATCATCAACG GTAAAGTTAA AGGCGGTTTC
ACTGTTGAAC TAAACGGTAT CCGTGCTTTC CTTCCTGGCT CTCTAGTAGA CGTACGTCCA
ATCCGCGACA CTGCTCACCT AGAAAACAAA GAGCTAGAGT TCAAAGTTAT CAAACTTGAC
CAAAAACGTA ACAACGTAGT TGTTTCACGT CGTGCAGTTA TCGAATCTGA GAACAGCGTT
GAGCGTGACG AGCTTCTAGA AACTCTACAA GAAGGTTCTG AAGTTAAAGG TATCGTTAAG
AACCTTACTG ACTACGGTGC GTTCGTTGAC CTAGGTGGCG TTGACGGTCT TCTACATATC
ACAGATATGG CTTGGAAGCG CGTTAAGCAC CCATCTGAAA TCGTTAACGT TGGTGACGAG
ATCCAAGTTA AAGTTCTTAA GTTCGACCGT GAGCGTACTC GCGTATCACT AGGTCTTAAG
CAACTAGGCG AAGATCCATG GGTAGCAATC GCTAAGCGTT ACCCAGAAGG TCACAAACTA
ACTGGTCGCG TAACTAACCT AACTGACTAC GGCTGCTTCG TTGAAATCGA AGAAGGCGTT
GAAGGTCTAG TACACGTTTC AGAAATGGAT TGGACTAACA AGAACATCCA CCCATCTAAA
GTTGTTAATG TTGGCGACGA AGTTGAGGTT ATGGTTCTTG AGATCGACGA AGAACGTCGT
CGTATCTCTC TAGGTCTGAA ACAGTGTAAA GCTAACCCAT GGCAGTCATT CGCTGAAGCA
CAAGCTAAAG GCGACAAAGT TACTGGTAAG ATCAAGTCTA TCACTGACTT CGGTATCTTC
ATCGGTCTAG AAGGCGGCAT CGACGGTCTA GTTCACCTAT CTGACATTTC TTGGAATGTT
GCTGGCGAAG AAGCTGTACG TGAGTACAAG AAAGGCGACG AGATCTCTGC AGTTGTTCTA
GCAGTAGACG CTGAGCGTGA GCGCATCTCT CTAGGCGTTA AGCAAATGGA AAACGACCCA
TTCAATGCTT ACGTTGCTGA TAACAAGAAA GGTGTTCTAG TTAACGCTAC TGTAACTGCT
GTTGACGCTA AAGGCGCTAC AGTTGAAATC GCAGAAGGCG TTGAAGGCTA CATCCGTGCT
TCTGAAGTAT CTCGCGATCG CGTAGAAGAT GCTTCTCTAA TCCTAAGCGC TGGTGATGTT
GTTGAAGCGA AGTTCACAGG TGTTGACCGT AAGAACCGCG TAATCAACCT ATCTATCAAA
GCTAAAGATG AAGCTGATGA GCAAGAAGCA ATGGCATCTA TCAACAAGCA AGACGAAGCT
GCTTTTGGTA ATGCAATGGC TGACGCTTTC AAAGCTGCTA AAGGCGAATA A
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| Protein sequence | MTESFAQLFE EFLNETEFQQ GSIVKGTVVA IENGFVLVDA GLKSESAIPA EQFKNAAGEL
EVEVGAEVDV ALDAVEDGFG ETQLSREKAK RHEAWIVLEK AYEEAETVVG IINGKVKGGF
TVELNGIRAF LPGSLVDVRP IRDTAHLENK ELEFKVIKLD QKRNNVVVSR RAVIESENSV
ERDELLETLQ EGSEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
IQVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPEGHKL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNVGDEVEV MVLEIDEERR RISLGLKQCK ANPWQSFAEA
QAKGDKVTGK IKSITDFGIF IGLEGGIDGL VHLSDISWNV AGEEAVREYK KGDEISAVVL
AVDAERERIS LGVKQMENDP FNAYVADNKK GVLVNATVTA VDAKGATVEI AEGVEGYIRA
SEVSRDRVED ASLILSAGDV VEAKFTGVDR KNRVINLSIK AKDEADEQEA MASINKQDEA
AFGNAMADAF KAAKGE
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