Gene VIBHAR_02834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02834 
Symbol 
ID5553190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2854736 
End bp2855455 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID640908316 
Producthypothetical protein 
Protein accessionYP_001446014 
Protein GI156975107 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAACA AGAATTCTGG AGACAAGATG TCGAAAACGC CACTGGTTGA TTTGACTAAC 
ATTTGTAAAT ACTACTCAAG CGGAGAGGCG GAAGTACGTG CGCTAGATGG CGTCGACTTG
ACCATCAACC AAGGGGAATT TCTTTCCATT CTTGGCCCGT CTGGCTCGGG GAAATCGACG
CTGATGAACA TGTTGGGCTG CTTAGATAAA CCGACCGATG GCCAATACCA ATTGGGTGGT
CAAAACGTCG CAAGTTTAAG CCCGAACGAA CTAGCCGGTA TTCGTAACCA AAAGATAGGC
TTTGTCTTCC AAAGCTTTAA CTTGTTGGAA TACGCGACAG CATTGGATAA TGTGGCACTG
CCGTTGGTTT ACTCTGGCAT CAAAGCCAAA GAACGTCGCC AGCGCGCAGC TAAATTGCTA
GAGCAAGTCG GACTAGGAGA TCGCCTCGAC CACAAACCAA ACCAGCTTTC TGGTGGTCAA
AAGCAAAGAG TGGCGATTGC GAGAGCCTTG GTCAACGATC CACAAATCAT CTTAGCGGAT
GAACCAACGG GTGCGTTGGA TTCAAAATCT GGCGCAGAGA TTGAAGCCTT GTTCAATCAA
CTCCACGCTG AAGGCAGAAC CTTGATCATC GTGACGCACG ATAACGCTCT TGCAGAGCGC
ACTAAGCGCA TCATCACCAT CAAAGATGGC AAGGTGATTT CGGATAGAGT GCCGCAGTAA
 
Protein sequence
MNNKNSGDKM SKTPLVDLTN ICKYYSSGEA EVRALDGVDL TINQGEFLSI LGPSGSGKST 
LMNMLGCLDK PTDGQYQLGG QNVASLSPNE LAGIRNQKIG FVFQSFNLLE YATALDNVAL
PLVYSGIKAK ERRQRAAKLL EQVGLGDRLD HKPNQLSGGQ KQRVAIARAL VNDPQIILAD
EPTGALDSKS GAEIEALFNQ LHAEGRTLII VTHDNALAER TKRIITIKDG KVISDRVPQ