| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02794 |
|---|
| Symbol | |
|---|
| ID | 5552797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2823121 |
|---|
| End bp | 2824365 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640908276 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001445975 |
|---|
| Protein GI | 156975068 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTTTTGC AAACTCTAGA ACAATTACAA ACAGGACAAT TAGTAGGAAT CAAACAATTG
AAGTTGGCGG AAGGGCTAAC TGAGTTTCCT ATGGAAATTT TAGAGCTTGC AGAAACGCTT
GAGGTATTAG ATTTATCCGG CAACGCACTG TCAGACTTAC CTCCAGAATT TGAGCAACTG
ATCAAGCTGA AAATCATCTT TGCTTCAAAC AACCTGTTCA CCCATTTACC AGAGGTTCTG
GGCAAGTTGC CAAACCTTGA GATGGTTGGG TTTAAAACCA ACAAGATTAA AGAGGTGAGT
GAAGCCTCGT TGCCAAGCCA GTTACGTTGG TTGATTCTGA CGGATAATGA GATTGAAGTT
CTCCCAAACA ACCTTGGTGA AAGACCGCGC CTGAGAAAAC TGGCACTGGC AGGCAACCGC
ATCAAGCAAC TGCCAAACAG CATGGAAAAC TTGGTCAATC TGGAATTGAT TCGTTTGTCT
GCTAACCAGC TTGAGCACTT CCCTGATGTG TTGATGAAGC TGCCTAAGCT GGCGTGGTTT
GCTTTCGCAG GTAACCCATT TTGCAAGCAT CCTTCTTCGC TAGACAGCGT GCCTAAAGTA
ACAACCGGCA GTTACTCACT TAACCATGTT CTCGGCCAAG GCGCGAGTGG GGTGATTTCT
CATGCGAATT GGACTGACGC GCATTATGAC TTTCCGAGTG AAGTGGCGGT AAAAGTGTTT
AAGGGTGAAG TGACCAGCGA CGGCTTCCCG CATGACGAGC TTGAAGCGTG TTTGCAAGCA
GGGCATCACA ACAATTTGGT GAAATCCATC GCGCAGGTGG ATGATGGTAA TGAGCTTGCG
TTGGTGATGG AGCTGATTCC AGACAGCTAC TACAACTTAG GTTTGCCGCC AACACTGGAA
ACCTGTACAC GAGACACCTT CCCACAAGGG TTTACCTTAA CTGTCGAGCA AGTAAATGCG
ATTGTTGAAC AGATGGTGGA TGTTTTTAAT CACTTGCATG ACAACAAGGT GTGTCACGGT
GATTTGTATG CGCACAATAC TTTGGTGAAT GAACAAGGTG AGATGATCTT CGGTGATTTT
GGTGCGGCGA GTATTTACGG CTACCTATCC GAACAGCAGC AAGCGGCGAT CAAAACCATT
GAATCCAGAG CGTTGACGTA CTTTATCGAA GATGTGTGTT CTGTTTGTGA AGATTCGAAA
GCAGCATTGG AAGTGATGAA TCGCTTTGCG TCGCTCGCGG CGTAA
|
|---|
| Protein sequence | MVLQTLEQLQ TGQLVGIKQL KLAEGLTEFP MEILELAETL EVLDLSGNAL SDLPPEFEQL
IKLKIIFASN NLFTHLPEVL GKLPNLEMVG FKTNKIKEVS EASLPSQLRW LILTDNEIEV
LPNNLGERPR LRKLALAGNR IKQLPNSMEN LVNLELIRLS ANQLEHFPDV LMKLPKLAWF
AFAGNPFCKH PSSLDSVPKV TTGSYSLNHV LGQGASGVIS HANWTDAHYD FPSEVAVKVF
KGEVTSDGFP HDELEACLQA GHHNNLVKSI AQVDDGNELA LVMELIPDSY YNLGLPPTLE
TCTRDTFPQG FTLTVEQVNA IVEQMVDVFN HLHDNKVCHG DLYAHNTLVN EQGEMIFGDF
GAASIYGYLS EQQQAAIKTI ESRALTYFIE DVCSVCEDSK AALEVMNRFA SLAA
|
|---|
| |