| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02747 |
|---|
| Symbol | uvrC |
|---|
| ID | 5555713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2768989 |
|---|
| End bp | 2770755 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640908229 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_001445928 |
|---|
| Protein GI | 156975021 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
|---|
| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAACG TCGAGGCTGT TGTCATTTAT GTAGGCAAAG CCAAAGATCT CAAAAAGCGC
CTCTCAAGCT ACTTTCGCAA GAAAGTCGAC AGTGAGAAGA CCCGCGCTCT CGTAAGTAAT
ATCGCTAAAA TTGATGTCAC GGTAACCCAC ACCGAGACGG AAGCGCTCAT CCTTGAGCAT
AACTACATCA AGCAATATTT ACCCAAATAC AATGTACTTC TGCGTGATGA CAAATCGTAC
CCTTACATTT TCATTAGCGG TCATAAACAT CCGCGATTGT CTATGCATCG TGGTGCGAAA
AAACGCAAAG GTGAGTACTT TGGACCATAT CCGGATTCTG GTGCAGTACG AGAAACTTTG
CACCTTTTGC AGAAAACACT CCCTGTTCGT CAGTGTGAAG ATACGGTTTA TTCCAACCGT
ACTCGCCCTT GTTTGATGTA CCAAATTGGT CGTTGTGCGG GTCCGTGCGT CAGCACGATT
ATTTCTGATG AAGAGTACGC CGAGTTGGTG GGTTTTGTGC GTTTGTTTTT GCAGGGCAAA
GATAAGCAAG TACTTGAACA GCTAATTGAG AAGATGGAAG TGGCAAGCCA GCAACTTCGT
TTTGAAGATG CCGCTAAGTT CCGTGACCAG ATCCAAGCGA TTCGACGCGT ACAAGAACAA
CAGTACGTTT CAGAAGACAG TATGGACGAT ATGGACGTAC TTGGTTTTGC CCAAGAGAAC
GGTATCGCAT GTATCCATAT CTTGATGATT CGTCAGGGCA AGGTGTTAGG CAGTCGCAGC
CATTTTCCCA AGATCCCACA GAACACCAGT CAACAAGAAG TATTTGATAG CTTCCTTACT
CAGTACTATC TGAGTCATAA CGAGGCACGC ACCATTCCGT CTCGTATTAT CCTGAATCAA
GAGCTGGGTG GTGACATCGA GCCGATTCAA CAAGCCTTGA GTGAAGTGGC GGGGCGTAAG
GTTCAGTTCC ATACCTCACC GACAGGGTCG CGCGGTCGTT ACCTTAAGTT ATCCAATACC
AATGCGTTGA CGGCGATTAC CACTAAGATC AATCACAAGA TGACGATCAA TCAGCGTTTC
AAGGCACTGA GAGAAGTCTT GGGTATGGAA ACCATCGCTC GCATGGAGTG TTTCGATATT
TCGCACACGA TGGGCGAGAG CACTATTGCC TCTTGTGTGG TGTTCAACAG TGAAGGCCCA
GTTAAGCAAG AGTATCGTCG TTACAACATC ACAGGTATTA CTGGCGGCGA TGATTACGCT
GCAATGGGAC AAGCCTTAGA GCGTCGTTAT TCGAAGCAGC TAGATGTAGA GAAGATTCCT
GACATTATCT TTATCGATGG TGGTAAAGGA CAACTCAATC GAGCGCATGA AATTATTTCC
CAATATTGGG GGGATTGGCC GAAGCGTCCA ATCATGATTG GTATTGCCAA AGGTGTTACT
CGTAAGCCGG GACTTGAAAC CTTAATTACC GTAGATGCTG AGGAATTTAA CTTGCCAAGT
GATGCGCCGG CATTGCACTT GATTCAGCAC ATCCGAGATG AGAGTCATAA CCATGCAATT
GCAAGGCACA GAGCGAAACG TGGCAAAACC CGTCGTACCA GTGCTTTAGA GGGGATTGAA
GGCGTAGGAC CGAAACGTCG TCAAGCCTTA CTCAAATACA TGGGTGGTTT GCAGGAATTG
AAGCGTGCAA GTGTCGAAGA AATCGCCAAA GTACCGGGAA TTAGTCACTC TTTGGCAGAA
ATTATTTTCC AAGCATTGAA ACAATAA
|
|---|
| Protein sequence | MYNVEAVVIY VGKAKDLKKR LSSYFRKKVD SEKTRALVSN IAKIDVTVTH TETEALILEH
NYIKQYLPKY NVLLRDDKSY PYIFISGHKH PRLSMHRGAK KRKGEYFGPY PDSGAVRETL
HLLQKTLPVR QCEDTVYSNR TRPCLMYQIG RCAGPCVSTI ISDEEYAELV GFVRLFLQGK
DKQVLEQLIE KMEVASQQLR FEDAAKFRDQ IQAIRRVQEQ QYVSEDSMDD MDVLGFAQEN
GIACIHILMI RQGKVLGSRS HFPKIPQNTS QQEVFDSFLT QYYLSHNEAR TIPSRIILNQ
ELGGDIEPIQ QALSEVAGRK VQFHTSPTGS RGRYLKLSNT NALTAITTKI NHKMTINQRF
KALREVLGME TIARMECFDI SHTMGESTIA SCVVFNSEGP VKQEYRRYNI TGITGGDDYA
AMGQALERRY SKQLDVEKIP DIIFIDGGKG QLNRAHEIIS QYWGDWPKRP IMIGIAKGVT
RKPGLETLIT VDAEEFNLPS DAPALHLIQH IRDESHNHAI ARHRAKRGKT RRTSALEGIE
GVGPKRRQAL LKYMGGLQEL KRASVEEIAK VPGISHSLAE IIFQALKQ
|
|---|
| |