| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02703 |
|---|
| Symbol | |
|---|
| ID | 5555401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2727361 |
|---|
| End bp | 2728647 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640908186 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001445889 |
|---|
| Protein GI | 156974982 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
|---|
| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGTA TAGTGATGTT TTTTGTAGCT CTGTTTGCGC TACTGCTAGG TTTCCCTGTT
GCCTTTACCT TTGGTGGCAT TGCATTAATT TTCGGCGTAT GGGCAGAAGG CATTGAGATG
TTTGCATTCA TGCCATATCG CATTCAATCC ATTATGGAGA ACACGGTGCT GATGGCAGTA
CCGCTGTTTG TTTTCATGGG ATTGGTATTA CAAAAGACCC GATTGGCTGA GCAACTGCTT
GAGTCGATGG GGCGTTTGTT TGGTGGTATT CGTGGCGGTA TCGCTATCTC TACCGTTTTA
GTGGGAGCGC TGCTTGCGGC ATCGACGGGT GTGGTCGGCG CATCGGTTGT CGCGATGGGC
CTAATCTCTT TGCCAGTAAT GCTTAAGTAC AACTACGACA AAGGACTGGC CTGTGGCACC
ATTTGTGCGT CTGGCACGCT AGGCCAAATC ATCCCGCCTT CAATAGTCTT AATTTTGCTC
GGTGATGTAT TAGGCGTACC CGTAGGTGAC TTATTCCAAG CGGCTGTATG GCCGGGCTTA
ATGCTGGTGG GTGCTTACGT TGTCTACATT CTGATTTATG CCAAGCTTAA CCCAGAGGCC
GCTCAACCTA TTGAGCGTGA TGAATCCATC AGCCGCCAAC AAGAGGTGAT AACCGCGCTT
AAAGCCGTAT TGCCACCACT TGCACTGATT ATTGTGGTTC TAGGTTCTAT CTTTGCGGGT
ATTGCTACTC CGACCGAATC TGCGGCGTTG GGTGGTGCAG GTGCGATAGT GCTTTCCCTG
CTTTACAGAC AGTTCAGCTG GTCGATGGTG TATGAGGCGT CTAAAGAGAC CGTAAAAGTG
ACCGCGATGG TGTTTGCAAT CTTGCTTGGT GCGACGGCAT TCTCAATGGC ATTTACCTAC
ACGGGCGGTG ACTACCTTGT TGAAGAGTGG ATGCTTCAAC TTCCGGGTGA GAAGTGGGGC
TTCTTGATCA TTACCATGCT GGTGATTCTT ATCCTCGGGT TTTTCATCGA CTTCGTAGAA
ATCTGTTTCA TCATCGTGCC AATTATTGCA CCGGTAGCGG AGCTTATGGG GATCAACATG
ACATGGTTTG CGATTCTGAT TGCGATGAAC CTTCAGACGT CATTCCTCAC ACCGCCATTT
GGTTTTAGCT TGTTCTATTT GAAGGGTGTG GCTCCTGCGG GTGTAACAAC GCGAGATATC
TACCGTGGTG TGATGCCATT CATTGCGATT CAAATTGTTG TGCTTGCTTC ATTGTTACTC
TTTCCGGGCT TCTACGGCAT GTCGTAA
|
|---|
| Protein sequence | MIGIVMFFVA LFALLLGFPV AFTFGGIALI FGVWAEGIEM FAFMPYRIQS IMENTVLMAV
PLFVFMGLVL QKTRLAEQLL ESMGRLFGGI RGGIAISTVL VGALLAASTG VVGASVVAMG
LISLPVMLKY NYDKGLACGT ICASGTLGQI IPPSIVLILL GDVLGVPVGD LFQAAVWPGL
MLVGAYVVYI LIYAKLNPEA AQPIERDESI SRQQEVITAL KAVLPPLALI IVVLGSIFAG
IATPTESAAL GGAGAIVLSL LYRQFSWSMV YEASKETVKV TAMVFAILLG ATAFSMAFTY
TGGDYLVEEW MLQLPGEKWG FLIITMLVIL ILGFFIDFVE ICFIIVPIIA PVAELMGINM
TWFAILIAMN LQTSFLTPPF GFSLFYLKGV APAGVTTRDI YRGVMPFIAI QIVVLASLLL
FPGFYGMS
|
|---|
| |