Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02678 |
Symbol | |
ID | 5555743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 2699126 |
End bp | 2700337 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640908161 |
Product | putative ABC transporter solute-binding protein |
Protein accession | YP_001445864 |
Protein GI | 156974957 |
COG category | [R] General function prediction only |
COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTATAC AGAGCTCCAA AATGAAAACA AAGATAAATA AACACGGATT ACGTATGAAA AAGCTACTTA GCACCATTGG CATTTTAGCC ACCACTTTTG CCACCTCCTC TTTCGCCGCT TCTCACTCAG AAGAATGGCA AAAAATCGAA CAACAAGCTG ACGGTCAAAC CGTTTATTTT CATGCTTGGG GTGGCAGCCA AGAGATCAAC CGCTATCTCC ATTGGGCACG CAAAGAGCTT AAATCTCGCT ACAACGTGAC GCTTAATCAC GTCAAAGTCA CTGATATTTC TGAAACCACT ACTCGTCTTA TTGCTGAAAA AGCCGCAGGA AAAAACAGCG GCGGCAGTGT TGATATGGTT TGGATTAATG GTGAAAACTT CAAATCAATG AAAGACAACC AACTGCTGTT TGGTCCTTTC GTAGAAGGCT TACCAAATTG GCAATATGTA GATAAAACTC TACCTGTTGA CGTCGACTTC TCAGAGCCAA CCGATGGCCT AGAAGCACCT TGGGGTGTCG GCCAACTCGT ATTTATTCAC GATGAAGAAA CTCTGAATAA CCCGCCTCGC TCTTATGCAG AAATGCTGAG TTACGCTAAA GCGTTTCCGA ACCGTCTGAC TTACCCTCGC CCGCCCGAGT TTCATGGTAC CAGCTTCATC AAGTCTCTAC TGATTGAGTT GAGTCACAAC GATCCAGTGC TGCAAAAACC AGTAACGGAA GAATCATTTA AAGCCGTCAC ACAACCACTA TGGGCATACC TAGATGAATT CCATAAAGTG GCATGGCGCG GTGGTAAGCA ATTTCCTGGC GGTACTGCCG AGTCCATTCA ACTGTTGGAT GACGGTCAAA TCGACCTAGC GGTGACCTTC AACCCGAACG CGGTTTTCTC TGCGCAATCG AGCGGCAACC TTGCAGAAAG TACGAAAGCG TATGCGATGG ATGCAGGGGC ACTGTCGAAC ATCCACTTCT TGGCGATTCC TTGGAACGCA AATGCCAATG CAGGTGCACA AGTTGTTATA AACTTTTTAT TAAGCCCTGA AGCGCAATCT CGCAAAGGTG ACATTAATAC TTGGGGTGAT CCTTCAGTGC TAAGCAGTCA ATACCTAATG GGTACGGCTA AGAATACCCA GCAATTCAAA TCTATCGAGG AGCCACATCC TAGCTGGCAA GCCGCGCTAG AAAAAGAATG GCTGAAACGT TACGGGAATT AA
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Protein sequence | MGIQSSKMKT KINKHGLRMK KLLSTIGILA TTFATSSFAA SHSEEWQKIE QQADGQTVYF HAWGGSQEIN RYLHWARKEL KSRYNVTLNH VKVTDISETT TRLIAEKAAG KNSGGSVDMV WINGENFKSM KDNQLLFGPF VEGLPNWQYV DKTLPVDVDF SEPTDGLEAP WGVGQLVFIH DEETLNNPPR SYAEMLSYAK AFPNRLTYPR PPEFHGTSFI KSLLIELSHN DPVLQKPVTE ESFKAVTQPL WAYLDEFHKV AWRGGKQFPG GTAESIQLLD DGQIDLAVTF NPNAVFSAQS SGNLAESTKA YAMDAGALSN IHFLAIPWNA NANAGAQVVI NFLLSPEAQS RKGDINTWGD PSVLSSQYLM GTAKNTQQFK SIEEPHPSWQ AALEKEWLKR YGN
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