Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02665 |
Symbol | ushA |
ID | 5555410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 2685410 |
End bp | 2687146 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640908150 |
Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
Protein accession | YP_001445853 |
Protein GI | 156974946 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTT CCAAATCCCT TTTGGTACTT TCGGTCGGTA TTGCCATGGC AGGTTGTTCT GATGATGAGA CCATTATCGT TCAAGCTCCT GATGGTGACG TAAACACGTG TTTTACCGCT GAGTCATGTA CTAAGTTCAC GGTTCTTCAC ACTAACGATA ACCACGGTCG TTTTTGGGAA AACAGCAAAG GCGAGTACGG CATGGCTGCA CGTAAAACGC TTATCGACTC TATTCGCGCA GAAGTAGAAG CAAACGGTGG TGAGACCATT CTGCTGTCTG GTGGTGACAT CAACACAGGT GTTCCAGAGT CAGATATGCA AGATGCAGTA CCAGACTTCG TAGGTATGAA CCTTCTAGGT TACGACGCAA TGGCGGTTGG TAACCACGAA TTTGATAACG CACTGTCTGT ACTAGACATG CAAGCAGAGC TAGCAGACTT CCCAATGCTA GCAGCGAACA TCTACAAAAA AGATGCTGAT GGCAATGTTA CCGACGAGCG TTACTTCGAC CCTTACCAAG TGTTCACAGT TAACGGCCTT AAAGTTGCCG TAATCGGTCT GACAACAAAA GACACAGCGA AACTGGTAAA CCCAGATAAC GTAGCCACTA TTTACTTCGA AGACCCACAA GTAGAGATTC AAAAAGTACT AGGTGAAATT GAAGCAAATG AAGACGTTGA TCTAGTATTT GCAACCACGC ACATGGGCCA CTACCAAGAT GGTCAACACG GTAGCGAAGC ACCTGGCGAC GTTCTATTAG CTCGCTCAGT AAAAGACGGT AAGCTAAATG CAATCATCGG TGGTCACTCA CAGAACCCTG TGTGTATGGA ACCAGGTACT AACGACTACG CAGACTTCAA ACCTGGCGAC GACTGTATGC CTGACCGCCA AAACGGTACT TGGATCATGC AAGCACATGA GTGGGGTAAA TACGTAGGTC GTGCGGACTT TGAATACTAC GATGACAAGC TTCACCTAGC GAGCTACGAG CTGATTCCAG TTAACCTTAA AGCGAAAGAT GAAAATGGTG ACTACCAATT CATCGGTGAA GAGATCCAAC CTGACGCAAC AGTGAAATCA ACACTGCAAC CATACCAAGA CCAAGGTCAA GAACTACTAG ACGTAAAAGT TTCTGAGACT GACGGTAAAC TTGAAGGTGA CCGTAGCGTA GTTCGCTCTC AACAAACAAA CCTTGGCCAC CTATTGGGTG AAGCGTACCG TACTTACGAG CTAGTTAACG CTGACTTCGG TGTAATGAAC TCAGGTGGCG TGCGTGATTC AATCGCAGCA GGTGATATCA CTTACCGCGA CGTACTAACG GTACAACCTT TCGGTAACTT CGTGACTAAA GCAACCATGA CGGGTGCAGA AGTGAAAGAG TACCTAGACG TAGTAGCGAC TAAGTCAGCA GGTTCTGGTG CTTACGCTCA ACTTGATAAC ATCAAACTAA CTGTCGATTG TGATGCGAGC GACGTAACGA TTACAGACAT CAACGGTAAA GGTTTCGATC TAGCAGAAAC TTACACCTTC TCTGTAATCA GCTTCAGCGC TGCGGGTGGT GATGATTACC CAATTATTGA TGTTGAGTCT ACTCAAATGA CAGATGCATC TGTACTACGT GAATTCTTCG TTAAGAACCC TCAGATTTCT GCAGAAGATT ACAACAAGAA CCTAGGCAAC ATCGAATACT TTAGCAACGG TGAAGCGGTG AAAGGCTGTC CTGCGACAGG TAGCTAA
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Protein sequence | MKFSKSLLVL SVGIAMAGCS DDETIIVQAP DGDVNTCFTA ESCTKFTVLH TNDNHGRFWE NSKGEYGMAA RKTLIDSIRA EVEANGGETI LLSGGDINTG VPESDMQDAV PDFVGMNLLG YDAMAVGNHE FDNALSVLDM QAELADFPML AANIYKKDAD GNVTDERYFD PYQVFTVNGL KVAVIGLTTK DTAKLVNPDN VATIYFEDPQ VEIQKVLGEI EANEDVDLVF ATTHMGHYQD GQHGSEAPGD VLLARSVKDG KLNAIIGGHS QNPVCMEPGT NDYADFKPGD DCMPDRQNGT WIMQAHEWGK YVGRADFEYY DDKLHLASYE LIPVNLKAKD ENGDYQFIGE EIQPDATVKS TLQPYQDQGQ ELLDVKVSET DGKLEGDRSV VRSQQTNLGH LLGEAYRTYE LVNADFGVMN SGGVRDSIAA GDITYRDVLT VQPFGNFVTK ATMTGAEVKE YLDVVATKSA GSGAYAQLDN IKLTVDCDAS DVTITDINGK GFDLAETYTF SVISFSAAGG DDYPIIDVES TQMTDASVLR EFFVKNPQIS AEDYNKNLGN IEYFSNGEAV KGCPATGS
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