| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02655 |
|---|
| Symbol | |
|---|
| ID | 5554046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2675694 |
|---|
| End bp | 2676395 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640908140 |
|---|
| Product | ribosomal small subunit pseudouridine synthase A |
|---|
| Protein accession | YP_001445843 |
|---|
| Protein GI | 156974936 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTAG ATAAATATTT GTGTGATGGA CTGGGTGCGA CTCGCAAGCA GGCAACTAAG
ATCATCAAAA GTGGCGAAAT AACGGTTGAT GGTGAAGTAC AAAAGAGTGG TGCATTCAAA
GTACCAGAAG GTGGTGTGGT TGAATGGGAA GGGCGCGAAG TTGGTGCTCC TGGCCCTCGT
TACATCATGT TGTACAAGCC TGCGGACTTT GTGTGTTCGC ATGAAGATGG GCACAACCCA
ACGGCGTTCG TTCTACTGGA TGAGCCAAAG GTAGAAAACT TGCACTTTGC TGGTCGTTTG
GATGTGGACA CTACCGGTCT TGTGCTGATC ACAGACGATG GTCAATGGTC GCACCGTATT
ACGTCACCAA AACACAAATG TGAGAAGACG TACCGCGTAT GGCTAGTGGA TGCGATTCAA
CCTGATTACG TTGAGAAGTT TGCCGAAGGT ATTGAGCTAC GCAACGAGCG TGAGCCAACA
TTGCCAGCAC ATCTTGAGAT CGTGAACGAA GCCGAAAACG AAGTGCTGCT AACGATTGTG
GAAGGCAAAT ACCATCAAGT GAAACGTATG TTTGCTGCGC TCGGTAACAA GGTAGAACAT
CTTCACCGTG AACGTATTGG TTCTATTGTG CTGGATGAAG CACTTGAGCC GGGTGATTAC
CGCTTCTTAA CAGAAGAAGA AGTTGAATCA GTTGTAAAAT AA
|
|---|
| Protein sequence | MRLDKYLCDG LGATRKQATK IIKSGEITVD GEVQKSGAFK VPEGGVVEWE GREVGAPGPR
YIMLYKPADF VCSHEDGHNP TAFVLLDEPK VENLHFAGRL DVDTTGLVLI TDDGQWSHRI
TSPKHKCEKT YRVWLVDAIQ PDYVEKFAEG IELRNEREPT LPAHLEIVNE AENEVLLTIV
EGKYHQVKRM FAALGNKVEH LHRERIGSIV LDEALEPGDY RFLTEEEVES VVK
|
|---|
| |