Gene VIBHAR_02649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02649 
Symbol 
ID5553823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2667500 
End bp2668171 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID640908134 
Producthypothetical protein 
Protein accessionYP_001445837 
Protein GI156974930 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAC TGTCAGACCT ATGTAAAGGC TATGTAGACG GGGGAGAATT TCATCCTGTA 
CTGCAAGGGG CAGAATTAAC ATTACAACAA GGTGAACAAA TTGCATTAAT GGGGGAGAGT 
GGTTCAGGTA AAAGTACCTT ACTTAACTTG ATCGCAGGTC TTGATACCGC TGATTCAGGC 
GAGATACAGT ACCCAAGTTT CGCCATGCAC AGCGCACCTG AACACCTTAG AACACTTTAC 
CGCCGCAATA ACATTGGTAA TATCTTCCAG CAGTTCAACC TGCTTCCTAC CTTGAATATC 
GCTGACAACA TCCGTTTCTG CCGCCAATTA AAAGGCTTGC CAGAAGACAA AGGCTTGTGG 
CGTCAAATTC TTTCTGCTCT CGACCTTATG CCGCTTTTAG GTCGTTACCC CGAAGAAGTG 
TCTGGTGGTC AGCAACAACG TGCTGCGATT GCTCGTGCGT TGTATATGGA ACCGAAAATT 
CTGCTTGCCG ATGAACCAAC AGGTAGCTTG GATGAGCGCA ATGCCGAAGC GGTAATGCGC 
TTACTTACGA GCCTAGCCCG CCAGTTAGAG TGTACTTTGT TGCTGGTTAC TCACAGTGAA 
AAGGTGGCAG AACACATGGA AGGTCGAATC CGTCTTCAAG GAGGGCAGCT GCATGTTATG 
GCCCGTAGTT AA
 
Protein sequence
MLKLSDLCKG YVDGGEFHPV LQGAELTLQQ GEQIALMGES GSGKSTLLNL IAGLDTADSG 
EIQYPSFAMH SAPEHLRTLY RRNNIGNIFQ QFNLLPTLNI ADNIRFCRQL KGLPEDKGLW 
RQILSALDLM PLLGRYPEEV SGGQQQRAAI ARALYMEPKI LLADEPTGSL DERNAEAVMR 
LLTSLARQLE CTLLLVTHSE KVAEHMEGRI RLQGGQLHVM ARS