Gene VIBHAR_02646 details

Gene Information

• Locus tag: VIBHAR_02646
• Symbol: nhaA
• ID: 5556119
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 2662436
• End bp: 2663611
• Gene Length: 1176 bp
• Protein Length: 391 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640908131
• Product: pH-dependent sodium/proton antiporter
• Protein accession: YP_001445834
• Protein GI: 156974927
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3004] Na+/H+ antiporter
• TIGRFAM ID: [TIGR00773] Na+/H+ antiporter NhaA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGATG TCATTCGTGA CTTTTTTAAA ATGGAATCCG CAGGCGGTAT CCTTCTTGTA 
ATTGCAGCTG CAATTGCTAT GACCATTGCA AACTCACCGC TTGGCGAAAG TTATCAAGCG 
ATGTTGCATA CTTATGTATT TGGTATGTCA GTGTCTCACT GGATTAATGA CGGCTTGATG 
GCCGTGTTCT TCCTATTAAT CGGCCTTGAA GTAAAGCGTG AGCTACTTGA AGGTGCACTA 
AAATCGAAAG AAACCGCGAT CTTCCCTGCT ATTGCAGCGG TAGGTGGTAT GCTAGCACCA 
GCACTGATTT ATGTGGCTTT CAACGCTGGT GACCCAGAAG CTATCTCTGG CTGGGCTATT 
CCAGCTGCAA CAGACATTGC CTTTGCTCTT GGTATTATGG CGCTTCTTGG TAAGCGTGTG 
CCAATCAGCT TGAAAGTATT CCTTCTAGCA TTGGCTATTA TTGATGACCT TGGTGTCGTG 
GTTATCATCG CGTTGTTCTA CACAGGCGAT CTATCAACGA TGGCATTACT TGTTGGCTTT 
GCCATGACCG GTGTGTTGTT CATGCTGAAC GCCAAAGAGG TCACTAAGCT GACGCCATAT 
ATGATCGTAG GTGCAATACT CTGGTTCGCT GTACTTAAAT CAGGAGTTCA CGCAACACTT 
GCTGGCGTAG TAATTGGTTT TGCTATTCCA CTTAAAGGCA AGAAAGGCGA GCATTCTCCA 
CTGAAACACA TGGAGCACGC ACTTCATCCA TACGTAGCGT TTGGTATTCT TCCTTTGTTT 
GCTTTTGCAA ACGCGGGTAT CTCGCTAGAG GGTGTATCGA TGTCAGGCCT GACTTCAATG 
CTACCGCTAG GTATCGCTCT GGGCCTATTG GTGGGCAAAC CGCTGGGTAT CTTCACATTC 
AGCTGGGCTG CTGTGAAACT GGGTATCGCC AAACTGCCTC AGGGCGTTAA CTTTATCCAT 
ATCTTTGCAG TGTCGGTTCT TTGTGGTATC GGCTTCACGA TGTCAATTTT CATCTCATCG 
CTAGCGTTTG CTAACGTAAG CCCTGAGTTT GATACCTATG CTCGATTGGG CATCTTGATG 
GGATCGACGA CCGCAGCGAT TATTGGCTAT GTACTACTGC ACTTCTCATT GCCGAAGAAA 
GCGGTAGAAG AAGTCGCAAG CGAGAAAAAC GCGTAA 

 

Protein sequence

MNDVIRDFFK MESAGGILLV IAAAIAMTIA NSPLGESYQA MLHTYVFGMS VSHWINDGLM 
AVFFLLIGLE VKRELLEGAL KSKETAIFPA IAAVGGMLAP ALIYVAFNAG DPEAISGWAI 
PAATDIAFAL GIMALLGKRV PISLKVFLLA LAIIDDLGVV VIIALFYTGD LSTMALLVGF 
AMTGVLFMLN AKEVTKLTPY MIVGAILWFA VLKSGVHATL AGVVIGFAIP LKGKKGEHSP 
LKHMEHALHP YVAFGILPLF AFANAGISLE GVSMSGLTSM LPLGIALGLL VGKPLGIFTF 
SWAAVKLGIA KLPQGVNFIH IFAVSVLCGI GFTMSIFISS LAFANVSPEF DTYARLGILM 
GSTTAAIIGY VLLHFSLPKK AVEEVASEKN A