Gene VIBHAR_02628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02628 
Symbol 
ID5555096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2643238 
End bp2643825 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content42% 
IMG OID640908113 
Producthypothetical protein 
Protein accessionYP_001445816 
Protein GI156974909 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATGA CAGACCAAGC TATTTTTAAC TATGTAAGCA ATTTTAGTGA GTACCAAAAA 
CGTTCAATGT TCGGCGGTAT TGGTTTATTC AGCAACGACG CAATGTTTGC TCTGGTAAGT 
AACGACTGCT GTTACTTGCG CGGTGGCAAT GGCCTCGATG AAGAGTTTAC TCAACTAAAC 
TGTGAAAAAT ATAAGCACGT CAAAAAACAA ACGACGGCAA CGGTAAATTA TTACGATGTA 
ACAGAATTGT TCGATTCCGG TTTTGCTGGG TTGGATGAGC TGCTACAAAA ATCAATTAAT 
TGTTCTATCA AGGAACGCAA ATACCAAAAG TCTTCAGCCA GTAGACGTTT GCGTGATCTA 
CCGAATATGC AGCTAACGCT AGAGCGTATG GTAAAGAAAG CTGGTATTGA TGACGTAGAC 
ACGTTTTTGG AGCTTGGCCC AGTAGAAGTC TTCAACAAAG TAAGAGTGGC ATACGGCAGT 
GATGTAGACG TTAAGCTGCT TTGGAAGTTT GCTGGTGCGA TTGATGGTAT CCATTGGAAA 
CTGATCCAAG AACCACGCAA GAAGCAGCTA CTGGCTATGT GTGAATAA
 
Protein sequence
MDMTDQAIFN YVSNFSEYQK RSMFGGIGLF SNDAMFALVS NDCCYLRGGN GLDEEFTQLN 
CEKYKHVKKQ TTATVNYYDV TELFDSGFAG LDELLQKSIN CSIKERKYQK SSASRRLRDL 
PNMQLTLERM VKKAGIDDVD TFLELGPVEV FNKVRVAYGS DVDVKLLWKF AGAIDGIHWK 
LIQEPRKKQL LAMCE