Gene VIBHAR_02608 details

Gene Information

• Locus tag: VIBHAR_02608
• ID: 5552920
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 2622622
• End bp: 2624346
• Gene Length: 1725 bp
• Protein Length: 574 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640908093
• Product: cysteine/glutathione ABC transporter membrane/ATP-binding component
• Protein accession: YP_001445796
• Protein GI: 156974889
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components
• TIGRFAM ID: [TIGR02868] thiol reductant ABC exporter, CydC subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGATT TACTCCCTTA TCTAAAACTG TACAAAAAGC ACTGGTTTGG CTTGTCTCTG 
GGGATGCTTC TAGCGTTTCT GACGCTGGCC GCTTCTGTTG GTCTATTAAC GCTGTCCGGC 
TGGTTTATCT CTGCGGCCGC TGTAGCGGGT TTGACCATTG CTCGTGAGAC CTTTAACTAC 
ATGCTGCCTG GCGCAGGTGT TCGTGGCGCT GCGATGGCGC GTACTGCTGG CCGCTGGGGC 
GAACGTGTTG TTAGCCACAA TGCAACCTTC AAGCTACTGA CTGATCTTCG TATCTTCTTC 
TTCAAGAAGC TTGCGCCGCT GATCCCTGGC CGCGTTTCTA CCATGCGTGA TGCGGATCTA 
CTGAACCGCC TAGTGGCAGA CGTAGATGCA ATGGACCACG TCTACTTGCG TCTTATTAGT 
CCTGTGATTG TTGGCGTATT CGGTATCTTA TCGCTAACTG CAGTGCTTGC TTTCTTTGAC 
TGGCATCTTG CCCTATTGCT TGGCGGTATC CTGACTGTGA TGCTGTTGGT ATGGCCGGTA 
TTGTTCTACA AACTTGGCAA ACATAACGGC GAACATCTGA CACAAAATAA AGCACAGCTA 
CGAGTGGCGA CACTGGACTG GCTTCAAGGT TACAGCGAAC TGAGCCTATT CGGTGCAGAA 
GAGCGTTACC GTAACGTAAT TCTAGAGAAG CAAAAACAAC TGCTATCCAA CCAGTTCGTC 
AATGCTAACC TAACGGGTAT GGCTTCTGGT CTGCTGATGC TAGCGAATGG TTTAACGCTC 
GTTGCTATGC TGTGGTTTGC TGCGGATGGC GTTGGTGGTC GTGCGCCAGA TCCTTGGATT 
GCGCTGTTCG CATTTGCCAC CATGGCGAGC TTTGAAATTC TGATGCCAAT TGCCGGTGCT 
TTCCAATACC TAGGTCAAAC ATTGACGTCC GCACGTCGAT TGAACGAAAT CACCTTAGCG 
GAGCCAGACG TTGTCTTCCC AGAAACATCG AAGCGTGAAG GTGATAAGCC GTTAAATATT 
GAGTTCGACA AGGTTGATTT CACCTACCCT GATGGCCAGC AAAAAGTGCT GAAAAACCTA 
ACACTGTCAC TGCCACTTGG CTCAAAAACG GCGATTGTTG GCCAAACCGG TTCAGGTAAA 
TCGACGCTTA TTCAATTGCT TTGTCGCTAC TGGGATGTAA ACCAAGGTCA AGTCAGCATT 
GGTGGTGCGC CTCTGCAAGA TTGGAGCGAA TCCGATCTGC GTGCTGCAAT CACAGTAGTT 
AGCCAACGTG TGGATGTGCT TAATGGCACA CTGCGTGACA ACCTATTGCT TGCTGCCCCA 
GAAGCAACGG ATGAACAGCT GGCTGGCATT CTGACTAAAG TGGACTTGGC GAATCTGTTA 
GACGAACCAG GACTGGATGC TTGGCTAGGT GACGGCGGTC GTCAACTGTC TGGTGGTGAG 
AAGCGTCGTA TCGGTATTGC TCGCGCGCTA TTGCGTGACG CTCCTATCCT GCTGCTTGAT 
GAACCAACTG AGGGTCTAGA CAAGCGTACT GAACAAACAG TGATGGAACT GTTCAAGCAA 
CACTTCACCA ATAAAACAGT CGTATTCATC ACCCACCGTT TGATTGAGCT AGAAAGCATG 
GACAACATCT GTTTGATGGA GCAAGGCGAG ATCATCGAAC AAGGTAACCA CCAAGCGCTA 
CTAGCTGAGA AAGGTCGTTA CCACCAGCTA TTACAATCTC TGTAA 

 

Protein sequence

MRDLLPYLKL YKKHWFGLSL GMLLAFLTLA ASVGLLTLSG WFISAAAVAG LTIARETFNY 
MLPGAGVRGA AMARTAGRWG ERVVSHNATF KLLTDLRIFF FKKLAPLIPG RVSTMRDADL 
LNRLVADVDA MDHVYLRLIS PVIVGVFGIL SLTAVLAFFD WHLALLLGGI LTVMLLVWPV 
LFYKLGKHNG EHLTQNKAQL RVATLDWLQG YSELSLFGAE ERYRNVILEK QKQLLSNQFV 
NANLTGMASG LLMLANGLTL VAMLWFAADG VGGRAPDPWI ALFAFATMAS FEILMPIAGA 
FQYLGQTLTS ARRLNEITLA EPDVVFPETS KREGDKPLNI EFDKVDFTYP DGQQKVLKNL 
TLSLPLGSKT AIVGQTGSGK STLIQLLCRY WDVNQGQVSI GGAPLQDWSE SDLRAAITVV 
SQRVDVLNGT LRDNLLLAAP EATDEQLAGI LTKVDLANLL DEPGLDAWLG DGGRQLSGGE 
KRRIGIARAL LRDAPILLLD EPTEGLDKRT EQTVMELFKQ HFTNKTVVFI THRLIELESM 
DNICLMEQGE IIEQGNHQAL LAEKGRYHQL LQSL