| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02560 |
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| Symbol | |
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| ID | 5552888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 2582074 |
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| End bp | 2583354 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640908045 |
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| Product | hypothetical protein |
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| Protein accession | YP_001445748 |
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| Protein GI | 156974841 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCTG CACTTTTGTT TGGCAGCTTT GGTCTGCTTC TGCTCATTGG CGTTCCAGTC
GGTATTGCTC TGGCGGCAGC CAGTATGGTC GCGATATTAA GCCTGCCCTT TCTTAACATC
GAGTTCTTAG TACAAGGCTT GTTGACGGGG CTCGACTCCT TCCCTCTCCT TGCTGTCGTT
CTCTTCACCT TAGCAGGCAA CCTCATGAGC CAAGGAGGGA TCTCGAAACG ATTATTGCAT
GTGGCGGAGG TCTTCTTTGG TCACTTTACT GGTGGGCTTG GCATCGTCGC CATTGTGGCG
TGTATGTTCT TCGCTTCCAT CTCTGGTACA GGGTCTGCCA CCGTTGCTGC TATTGGCCTG
ACGATGATTC CCTCTATGGT GAAGAAAGGC TACGACCGCA GCTTTGCCGG TGCCTTGATC
GCCTCTTCCG GCGGGATTGG CGTCATTATT CCACCCTCAG TGGTGATGAT CGTCTACGCG
ATCACAGCTG AAGTCTCGGT CACCAAGATG TTCATGGCGG GCATCATTCC TGGCTTGGTC
GTCGGTATGG TATTGATCGG CTACTGTCTA ATTGTCTCCA AAATGCGGGG CTACACAGGT
AACGAGCACA AAGCGACTTG GGCAGAGCGT CTTGATGCGC TAAAAGAAGC CAGTTGGGCA
ATGTTACTAC CCGTTATTAT TCTCGGTGGC ATCTATTCCG GCATCTTCAC GCCTACCGAA
TCAGCCGCCA TTGGTGTGCT CTATGGCTTG TTCTTTGGCA TGTTTGTTTA TAAAGAACTC
AAACCAGCGC AAGTGGTGAA AATCATTCTA GAATCGTCAC TGTTAGTTGG CGCTGTGCTC
GTCATTGTGG GTGCGTCCGT GACGTTTGGC CGTATATTGA CGCTAGAACG TCTACCAACC
GAGATCGCTC AGTTCATTCT ATCGATTACC GAAAACAAAC TGCTGATACT GCTTTGCATC
AATGTTCTGT TGTTGCTTGT CGGTACCTTC ATGGAAACGC TGGCGGCCAT TGTTATTCTC
ACACCAATTC TGCTACCCAT TACGTCAGCA CTCGGTATGG ACCCCGTTCA TTTTGGTATC
GTAATGATCG TAAACTTGGC CATTGGCTTT GTTACGCCTT CTCTGGGTTC CAACCTGTTT
ATGGCAAGTC AGGTAGGCAA AGTACCAATA GAATCGCTCT CTAAAGCCAT TATGGGCTGG
ATTGGAGCAA TTATAGTGGC CTTGATGTTG ATTACCTTCA TCCCTGCCAT CTCTCTATCG
CTGCCTGCGC TTTTATCCTG A
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| Protein sequence | MTSALLFGSF GLLLLIGVPV GIALAAASMV AILSLPFLNI EFLVQGLLTG LDSFPLLAVV
LFTLAGNLMS QGGISKRLLH VAEVFFGHFT GGLGIVAIVA CMFFASISGT GSATVAAIGL
TMIPSMVKKG YDRSFAGALI ASSGGIGVII PPSVVMIVYA ITAEVSVTKM FMAGIIPGLV
VGMVLIGYCL IVSKMRGYTG NEHKATWAER LDALKEASWA MLLPVIILGG IYSGIFTPTE
SAAIGVLYGL FFGMFVYKEL KPAQVVKIIL ESSLLVGAVL VIVGASVTFG RILTLERLPT
EIAQFILSIT ENKLLILLCI NVLLLLVGTF METLAAIVIL TPILLPITSA LGMDPVHFGI
VMIVNLAIGF VTPSLGSNLF MASQVGKVPI ESLSKAIMGW IGAIIVALML ITFIPAISLS
LPALLS
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