Gene VIBHAR_02559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02559 
Symbol 
ID5554479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp2581514 
End bp2582077 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content46% 
IMG OID640908044 
Producthypothetical protein 
Protein accessionYP_001445747 
Protein GI156974840 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGGT TTCGCTTACT AGACAAATAC CTAGAACCTA CCCTTATCGT TGTCGCGATC 
TCGATGATGA CAACTTTACT GTGCTTGCAA ATCGCACTAC GCCTATTTGA CGCAACGATC 
GCGTGGGCTG AAGAGTTGGC TCGTTATTTA TTCGTATGGG CGATGTACCT GAGCATCAGC 
TATTGCATAC GAGATGATCG ACACATCCGC ATTCGTGTGT TCATCGATAA ACTCCCGGGC 
AATTGGACAC AATTCAGTTT GATTGTCTCT GATCTTATCT ACCTTGCCTT TAGTGCCACT 
GTCGCCTGGT TTGGATTTAA AGTTATCAAC CGTAGCCTGC AACTCGGTCA GATTGCTCCC 
GCAATGGAAA TACCTATTGC TTGCCTGTAT GGGTCCGTTT TGGTTTGCGC AATCTTAAGC 
TGTGTGCGCT TGGTAACCAG CATTTATCAA CGCACTAGCG CTCTATCCAA TACCAGCGAA 
CGGATACGCT TTTCACGCCA ACGCTATCGC CATCTTAAAG CCAAGTATCG TACTTCTAAC 
CGACTATTGG AGCTTAACGC ATGA
 
Protein sequence
MKWFRLLDKY LEPTLIVVAI SMMTTLLCLQ IALRLFDATI AWAEELARYL FVWAMYLSIS 
YCIRDDRHIR IRVFIDKLPG NWTQFSLIVS DLIYLAFSAT VAWFGFKVIN RSLQLGQIAP 
AMEIPIACLY GSVLVCAILS CVRLVTSIYQ RTSALSNTSE RIRFSRQRYR HLKAKYRTSN 
RLLELNA