| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02553 |
|---|
| Symbol | |
|---|
| ID | 5555389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2576019 |
|---|
| End bp | 2576753 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640908038 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001445741 |
|---|
| Protein GI | 156974834 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAC TTGCCTTAGT CACAGGCGGC AGTGGCGGAC TGGGTGCCGC CATTTGTCGC
AAGCTAGCTC AATCTGGATA TCGCGTAATT CTGACTTACA ACAGTAATCA GAAAGCCGCC
GACGACGTGC TTTCTTCGTT ACCACGTAAC GATCATTTGG CATTCAAACT GAACGTGGCA
GATTCGGGTG AGATTGAACA GCTTAAACAT CAAGTCAGTG AAATGAGCGA CAAGCTAGAT
TTTTTGGTCA ATTGTGCGGG GATGACGAAG TTTGTCGCGC ATGCCGATCT GCAAAGTTTG
GATGACCAAC TGTTTGATCA AATTTTCCAA GTGAACGTCC GTGCGCCTTT TGCCATGGTT
CGAGCGTTTG AGCCTTTGCT CAAGCAAGCC AATGGTTGTG TGGTGAACAT TACTTCTATC
GCGGCACAGA CTGCGATGGG CAGCAACATT GCTTATTGTG CAAGTAAATC TGCCGCAGAA
AACATGACCC GTTCTTTAGC TCGCGCTTTG TCTCCCGAGA TTCGCGTTTT GGCGGTAGCG
CCTGGGCTTG TCGACACCGA ATTTGTCAAA GGCTTGGACG ATGCTTGGCG CAATCAACAA
GAACAATCCA CGCCGCTCAA GCGTTTAGCC AATGATGAAG AAGTTGCTCA AGCTGTGTAC
GCCGCGGCAG AGGTTCTGAC CTTCTCGACA GGCAATACCA TCGCGGTTGA TGGCGGTCGA
CCTCTAGGAC TGTAA
|
|---|
| Protein sequence | MSKLALVTGG SGGLGAAICR KLAQSGYRVI LTYNSNQKAA DDVLSSLPRN DHLAFKLNVA
DSGEIEQLKH QVSEMSDKLD FLVNCAGMTK FVAHADLQSL DDQLFDQIFQ VNVRAPFAMV
RAFEPLLKQA NGCVVNITSI AAQTAMGSNI AYCASKSAAE NMTRSLARAL SPEIRVLAVA
PGLVDTEFVK GLDDAWRNQQ EQSTPLKRLA NDEEVAQAVY AAAEVLTFST GNTIAVDGGR
PLGL
|
|---|
| |