Gene VIBHAR_02542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02542 
Symbol 
ID5555749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2565897 
End bp2567108 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content48% 
IMG OID640908027 
Producthypothetical protein 
Protein accessionYP_001445730 
Protein GI156974823 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTACA AACCAGAAGA CTCAATAAAG ATAGCCATTG CAGATGTAAG TATCGGTATG 
TTCGTGACTG CAATCGAACA AAATAAACGC GTTAACCTCG CCAATGCGGG ACGTGTTTCC
ACTGCGCAGG GCATTCAAAA GCTGCAAGCA AGTGGGGTGA AGTTCGTTTG GGTCGACCAG
AAACTTTCTG CTCAAGAGTG CGTGTTCAAA CCTGTTGAAG AAGAACACGA TGTCACCCTA
GCAGCCTCTG AGGTGATGAC TACGCCAAAA ATTCAACGCG CGTTTCGTTC TCGCGATGCG
CAGCATAAAC GTGCCAAAAA ACTGATTGCG GAAGCGAAGT GTTTGGCGCA AAAACTGCTT
AACCAAACCT TTGAAGGCAA GGTCATTGAA GTCAACGAGA TTGAATCGTG GGCGGATGAC
ATGATCGACA GCGTCTTTAT CGACTCAGAC GCGCTTCAGT GTGTGTCGGC GCTGCGCCAA
AAAGACAGCT ATTTGCTTGA GCATTCAGTG AACGTCGCTT GTTTACTGGT TTCCTTCGGT
AAGCATTTGG GTCTTGATAA AGACACGCTC AAGCAGTTGG CGATTGGTGG CATCATTCAT
GATGTGGGTA AAATCAAAGT CGATGACGAG ATCTTACATA AGCCAGCGCG TTTAACGCCG
GAAGAATTTG AGCACATGAA ACTGCACCAA GTGTTCGCAG GTGAAATCAT TCTTGGCGTA
AAAGGCCTGA GTGACGTCAG TCGAGATGTG TGTTTGATGC ACCATGAGAA GCTCGACGGT
ACCGGTTATC CGTTGGGTTT GTCTGGCGAC CAGATCCCAA TGCACGGGCG CATGAGCTGT
ATCGTCGATA TCTACGATGC GTTAACGGCA GACCGCGTCT ACAAAAAGGG TATGAGTTCG
GCAGAAGCGT TTAAAATCCT ATTGAGTTTG ACCCCGTTCC ACCTTGATCC TGATTTGGTG
TACAAGTTCA TCAACTGCAT TGGCGTATAC CCTGTCGGCT CGATTATCCA ATTGAGCGAT
GGACGAATCG GCATTGTGTG GACATCCAAC GATTCTCAGC CGCTGAAGCC AATCGTAAAG
TGTTTCTACT CACGTAAATA CAAGCGTTAC ATCGATGTCG CGATGGTGGA TTTAAAAAGC
AGTTCGTATT CGGTAGAGAA GGCGATAGCG CCGTCATCGT TGGAAGTGGA CCCTAAACCT
TTCTACGACT AA
 
Protein sequence
MQYKPEDSIK IAIADVSIGM FVTAIEQNKR VNLANAGRVS TAQGIQKLQA SGVKFVWVDQ 
KLSAQECVFK PVEEEHDVTL AASEVMTTPK IQRAFRSRDA QHKRAKKLIA EAKCLAQKLL
NQTFEGKVIE VNEIESWADD MIDSVFIDSD ALQCVSALRQ KDSYLLEHSV NVACLLVSFG
KHLGLDKDTL KQLAIGGIIH DVGKIKVDDE ILHKPARLTP EEFEHMKLHQ VFAGEIILGV
KGLSDVSRDV CLMHHEKLDG TGYPLGLSGD QIPMHGRMSC IVDIYDALTA DRVYKKGMSS
AEAFKILLSL TPFHLDPDLV YKFINCIGVY PVGSIIQLSD GRIGIVWTSN DSQPLKPIVK
CFYSRKYKRY IDVAMVDLKS SSYSVEKAIA PSSLEVDPKP FYD