Gene VIBHAR_02523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02523 
Symbol 
ID5553746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp2547933 
End bp2548424 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content46% 
IMG OID640908009 
Producthypothetical protein 
Protein accessionYP_001445712 
Protein GI156974805 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTAATA CCAAAGGTTT TACACTGATA GAATTGGTGG TTTGTATCGT CATTCTTGGC 
GTGGTAAGTG TCGTTGCGCT CCCAAAATTT CTTGGTATCC AGAAGGATGC TCGCATCGCT 
GTCTTGTATG GTGCCCGTGA GGCGCTGATG ACCGCCAACA ATCAGGTCTA CGCAAAAGCC 
GTGATCCAGT CGCAAGAAAA CGTCGATTCT GGAGAGCTGA TGAACATTGA CTTGGACAAC 
GACGGCGTTA ACGATTTGAT TGGCTATTAC GGCTATATTA AGAATGTGAT TCCGGCTCAC 
GATTTGGCGG GATTTGATCC TCAGTTAACC ATCAATCGCT GGTATGGCGT CGAAGACGAA 
GAAGAACCCT ACTTTCTTAT CGGCTTCGCA AATAAGCCTG TCGACATTTT TCATCTTTGC 
TACGTAGAGG TGTATTATCC GAAAACCGCA GGTGGTAAAA TAAAATACGG AATTCAAACC 
AGAGACTGCT AA
 
Protein sequence
MRNTKGFTLI ELVVCIVILG VVSVVALPKF LGIQKDARIA VLYGAREALM TANNQVYAKA 
VIQSQENVDS GELMNIDLDN DGVNDLIGYY GYIKNVIPAH DLAGFDPQLT INRWYGVEDE 
EEPYFLIGFA NKPVDIFHLC YVEVYYPKTA GGKIKYGIQT RDC