| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02501 |
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| Symbol | |
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| ID | 5555800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 2517924 |
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| End bp | 2521961 |
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| Gene Length | 4038 bp |
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| Protein Length | 1345 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640907987 |
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| Product | ATP-dependent RNA helicase HrpA |
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| Protein accession | YP_001445690 |
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| Protein GI | 156974783 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA TAGGAAACGC TTTGACTTCG TCACAGCCCC CAAAAAAGAA TCCCGCTGAA
GAGCAAGCGA CACCGTCAAA TGGTGCGCAA AATGCCAAAG CGAAGAAGGC TAATGCATCT
CAAGCACAAG CTTCTCAGAA TGCTACGCCT CAGGCTCAAG TAAATAACGC GGCGTCACTA
CGCAAGGCAC TTAACCAGTG CATGATGCGT GACCGCTTCC GCTTGAGTAA ACGAATCTCT
GGTGCAAGTA AAATCAAAAA AGACGCAGCA CGTAACGCTG TGTTTGATGA AATCGCATTA
GACATCGCCA AATCCATGAT GGTTGTGGAG CAACGCAGTA GCTACAAACC GACGATTGAA
TACCCTGAAA TCCTTCCAGT CAGCCAAAAA CGCGACGACA TTGCGAAAGC GATCGAAGAA
AACCAAGTGG TAATCGTTGC GGGTGAGACA GGTTCAGGTA AAACCACTCA GCTACCAAAA
ATCTGTGCTG AGCTTGGTCG CGGTAAATTC GGTCTGATTG GTCACACTCA GCCTCGTCGT
CTTGCGGCGC GTTCGGTTGC AAACCGTATT GCCGAAGAGA TGGAAACCAA GCTTGGTGAG
TTTGTTGGTT ACAAGGTTCG ATTCAACGAT CAGATCTCTG AAAATACCCA AATCAAATTG
ATGACGGACG GTATCTTGCT GGCTGAAATT CAGCATGACC GCTTCTTGAA CCAATACGAC
ACCATCATTA TCGATGAAGC GCACGAGCGC AGTCTTAACA TCGATTTCAT CTTGGGTTAC
TTGAAAGAGT TGCTACCACG TCGTCCTGAT CTGAAAGTGA TCATCACATC GGCAACCATC
GACCCTGAGC GTTTTTCAAA ACACTTCAAC AACGCACCAA TCATTGAAGT GTCAGGTCGT
ACTTACCCAG TAGAAACGCG TTACCGCCCA CTAAGTGGTG ATGACGATAA TGATCGTGAC
CAACTTGAAG GTATCTTCGA AGCGGTAGAC GAACTGTGCG ATGAAGGTTT AGGTGACATC
CTGATCTTCA TGAACGGTGA GCGTGAAATC CGTGATACCG CTGACGCACT GTCTAAACGT
AATCTGAAGA GCACGGAAAT TGTGCCGCTT TACGCGCGTT TGTCGGCGGG TGAACAGAAC
AAGATCTTCC AACCTCATAC TGGTCGCCGC ATTGTACTGG CAACCAACGT AGCAGAAACC
TCGTTGACGG TTCCGGGCAT CAAATACGTG ATCGATCCGG GTACGGCACG TCTCAGCCGA
TACAGTTACC GTACTAAAGT TCAGCGTCTA CCAATCGAGC CAGTTTCTCA GGCGAGTGCG
AACCAGCGTA AAGGTCGTTG TGGTCGTGTG GAAGAGGGTA TCTGTATCCG TCTGTACTCA
GAGGAAGATT TTGAGTCACG TCCGGAGTTT ACCGATCCTG AGATCCTGCG TACCAACCTA
GCGTCGGTTA TCTTACAGAT GACGGCACTT GGTCTGGGCG ACATTCAAGC CTTCCCATTT
GTAGAAGGGC CTGACAAACG TAACATTCAA GACGGTGTTC GCCTTCTAGA AGAGTTGGGT
GCAATCAATT CTGATGCGAA AGAATCGAAG AAACGCCTAA CCAGCATTGG TCGTCAACTT
GCACGTCTTC CAATCGACCC ACGTTTAGCA CGTATGGTAT TGGAATCACC AAAGCAAGGT
GCGTTGAAAG AAGTGATGAT CATCGCTGCG GCATTGTCGA TTCAAGACCC GCGTGAGCGT
CCAAGTGACA AGCAGCAATC TTCAGATGAC AAGCACAAAC GTTTCTTCCA TGAAGAGTCA
GATTTTCTGA CGTTTGTGAA CCTGTGGAAT TACACACAGA AGCAGCAAAA AGCGCTAACG
GGTAACCAGT TCCGCAAGCA ATGTAAACAA GATTACTTGA ACTACTTACG CGTGCGTGAG
TGGCAAGATG TGTACTTCCA AATTCATCAG TCGATGCGTG AAATGGAATT CAAACTTAAC
GATGAGCCTG CGTCGTACCA TGGCGTACAC AGCTCAATCC TTGTTGGTTT GTTGTCGCAC
ATCGGTATGA AAGACCAAGA GAAGAATGAA TACCAAGGCG CGCGTAACGC TCGTTTCCAT
ATCTTCCCTG CATCGGGTCT ATTCAAGAAA CAACCTAAGT GGATCATGTC TGCTGAACTG
GTGGAAACCT CAAAACTTTG GGGCCGTATC ATCGCGAAGA TTCAACCAGA GTGGATTGAA
CCGTTAGCGA AGCACCTAAT TAAGCGCAGC TACAGCGAGC CGCATTGGTC GAAGAAACGT
GCAGCAGTTT TGGCGCACGA GAAAGTGATG CTTTACGGTG TGCCAATTGT ACCGAAGCGT
TTGGTGAACT ACGGCAGTAT CGATCCTACT GTAAGTCGTG AGCTATTCAT TCGTAGCGCG
CTAGTGGAAG GCGAGTGGGA AACCAAACAC GCGTTCTTTA AGCAAAACCG TAAGCTTCTT
CAAGAAGTGG AAGAACTTGA ACACAAGTCG CGTCGTCGTG ACATCTTGGT GGATGACGAT
GAGCTGTTTG ATTTCTACGA CCAACGCGTT GGCACTGAAG TGGTCTCTGG CAAACACTTC
GATACGTGGT GGAAGAAAGC ATCAAAAGAT AACAAAGAAC TGCTGAACTT TGAAAAAGAG
ATGCTGTTCA AGGGCGATGC AAGCCACGTT ACTGATTTGG ATTACCCGAA CTTCTGGTAC
CAAAACAACC TGAAACTCAA GTTGAGCTAC CAGTTTGAAC CGGGTGATGA TAGTGACGGT
GTAACGGTGC ATTTGCCGTT GCCGATCTTG AACCAAGTTG AGCCTGCGGG TTTTGACTGG
CAGATCCCAG GTTTACGCCA TGAGCTTGTG GTGAGTTTGA TTAAATCGCT GCCGAAGACA
GTGCGTAAGA ACTTTGTTCC TGCACCAAAC TACGCCGATG CCTTCTTAGC TCGTGCAACG
CCGATGGAAG CGCCACTACT GGACTCATTA GAGAAAGAGT TGCGTCGTAT GACGGGTGTG
GAAGTTCTTC GCGAAGATTG GAATATGGAT CAAATTCCGG AGCACTTGAA GGTGACTTTC
CGCGCGGTTG ACCATAGAAA TCGCAAGTTG AAGGAAAATA AAGACCTTCA TGAATTGAAA
GAGAGCTTGA AAGATAAAGT TCAAGAAACT CTTTCAAAAG TAGCGGATGA CGACATTGAG
CAACAAGGTC TGCACACGTG GAGCTTTGGT GAGTTGCCGA AGGTATACCA ACAAAAACGC
GGCGGTTACG ACGTTAAAGC GTACCCGGCG ATTGTGGATT CTAAAGACAG TGTTGAAATC
AAACTGTACG AGACCGAATA CGAGCAGGTC ACGGCAATGC AAGCGGGTCA GCGTCGTCTG
ATTTTGCTGA ACGTGCCGTC GCCAATCAAA TACCTGCACT CTAACTTGCC GAACAAGTCG
AAGTTGGGGC TGTACTTTAA CCCATACGGC AAGGTGCTGG ACCTGATTGA TGACTGTATC
GCGTGTGGTG TCGATAAGCT TATTGAAGAG CAGGGCGGTT TGGTTTGGGA GCCAGAGAAG
TTTGACGCGC TGAAAGAACA CGTTCGTGCT GAACTTGGTG ATACCGTGGT GGAAATTGCG
CAGCAAGTGG AAACCATTCT GACGACCGCT TTCAACATCA ATAAGAAGTT GAAAGGCAAG
ATCGACTTCA CCATGGCGTT TGCACTATCG GACATCAAAG CACAAGTCGA AGGATTGATC
TTCAAAGGCT TCGCGACAGA ATGTGGTTGG AAACGTCTGC CAGATATTCT GCGTTACATG
CGTGCGATTG AGCGTCGTAT GGAGAAGCTG CCGATCGATC CAAACAAAGA CCGTTTACAC
ATGCTGAAAG TGGAATCAGT GACGAGCGAC TACAAAGAGC TGCTCAACAA AATTCCGAAA
GGCATGGTGA TTCCAGAGAA CGTGAAAGAG ATTCGTTGGA TGATCGAAGA GCTTCGCGTG
AGCTTTTTTG CTCAACAATT GGGCACTCCG TACCCAGTTT CTGATAAACG TGTCAAAAAT
GCGATTGATG CTTGCTAA
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| Protein sequence | MKRIGNALTS SQPPKKNPAE EQATPSNGAQ NAKAKKANAS QAQASQNATP QAQVNNAASL
RKALNQCMMR DRFRLSKRIS GASKIKKDAA RNAVFDEIAL DIAKSMMVVE QRSSYKPTIE
YPEILPVSQK RDDIAKAIEE NQVVIVAGET GSGKTTQLPK ICAELGRGKF GLIGHTQPRR
LAARSVANRI AEEMETKLGE FVGYKVRFND QISENTQIKL MTDGILLAEI QHDRFLNQYD
TIIIDEAHER SLNIDFILGY LKELLPRRPD LKVIITSATI DPERFSKHFN NAPIIEVSGR
TYPVETRYRP LSGDDDNDRD QLEGIFEAVD ELCDEGLGDI LIFMNGEREI RDTADALSKR
NLKSTEIVPL YARLSAGEQN KIFQPHTGRR IVLATNVAET SLTVPGIKYV IDPGTARLSR
YSYRTKVQRL PIEPVSQASA NQRKGRCGRV EEGICIRLYS EEDFESRPEF TDPEILRTNL
ASVILQMTAL GLGDIQAFPF VEGPDKRNIQ DGVRLLEELG AINSDAKESK KRLTSIGRQL
ARLPIDPRLA RMVLESPKQG ALKEVMIIAA ALSIQDPRER PSDKQQSSDD KHKRFFHEES
DFLTFVNLWN YTQKQQKALT GNQFRKQCKQ DYLNYLRVRE WQDVYFQIHQ SMREMEFKLN
DEPASYHGVH SSILVGLLSH IGMKDQEKNE YQGARNARFH IFPASGLFKK QPKWIMSAEL
VETSKLWGRI IAKIQPEWIE PLAKHLIKRS YSEPHWSKKR AAVLAHEKVM LYGVPIVPKR
LVNYGSIDPT VSRELFIRSA LVEGEWETKH AFFKQNRKLL QEVEELEHKS RRRDILVDDD
ELFDFYDQRV GTEVVSGKHF DTWWKKASKD NKELLNFEKE MLFKGDASHV TDLDYPNFWY
QNNLKLKLSY QFEPGDDSDG VTVHLPLPIL NQVEPAGFDW QIPGLRHELV VSLIKSLPKT
VRKNFVPAPN YADAFLARAT PMEAPLLDSL EKELRRMTGV EVLREDWNMD QIPEHLKVTF
RAVDHRNRKL KENKDLHELK ESLKDKVQET LSKVADDDIE QQGLHTWSFG ELPKVYQQKR
GGYDVKAYPA IVDSKDSVEI KLYETEYEQV TAMQAGQRRL ILLNVPSPIK YLHSNLPNKS
KLGLYFNPYG KVLDLIDDCI ACGVDKLIEE QGGLVWEPEK FDALKEHVRA ELGDTVVEIA
QQVETILTTA FNINKKLKGK IDFTMAFALS DIKAQVEGLI FKGFATECGW KRLPDILRYM
RAIERRMEKL PIDPNKDRLH MLKVESVTSD YKELLNKIPK GMVIPENVKE IRWMIEELRV
SFFAQQLGTP YPVSDKRVKN AIDAC
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