| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02395 |
|---|
| Symbol | |
|---|
| ID | 5556058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 2402978 |
|---|
| End bp | 2405587 |
|---|
| Gene Length | 2610 bp |
|---|
| Protein Length | 869 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640907881 |
|---|
| Product | aconitate hydratase |
|---|
| Protein accession | YP_001445584 |
|---|
| Protein GI | 156974677 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1048] Aconitase A |
|---|
| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA CCACAAATAT AAATACTCAA TATCGTAAGC CGCTCCCGGG AACCCAGCTC
GATTATTTTG ATACCCGAGA AGCAGTTAAC GATATTTCTC CTGGAGCCTA TGAAAAGCTC
CCATACACCT CGCGCGTTTT AGCTGAGCAG TTGGTTCGCC GCTGTGACCC GAATACGCTT
ACTGATAGCT TAAAACAGTT GATCGAACGC AAGCGTGACC TTGATTTTCC TTGGTATCCG
GCACGCGTGG TTTGCCATGA CATCCTTGGA CAAACCGCAT TAGTCGATCT CGCTGGCCTG
CGTGATGCGA TTGCCGAACA AGGCGGTGAC CCAGCGAAAG TAAATCCGGT GGTTGAAACG
CAGTTGATCG TTGATCATTC ACTGGCGGTT GAACACGCAG GCTTTGACTC AGAGGCGTTT
GAGAAAAACC GCGCGATAGA AGAGCGCAGA AACGAAGACC GATTCCACTT TATTGAATGG
TGTAAAACGG CGTTTGAAAA CGTCAGCGTT ATTCCTGCGG GTAACGGAAT CATGCACCAA
ATCAACTTGG AGAAAATGTC TCCGGTTGTG CAAGCCAAGC AGGGCATTGC TTACCCAGAT
ACCTGTGTCG GCACGGACAG TCACACACCT CACGTTGATT CTCTTGGTGT TATTGCGATT
GGTGTCGGCG GTTTAGAGGC GGAGACGGTT ATGCTTGGTC GCCCGTCGAT GATGCGTCTG
CCAGACATTG TTGGTGTGAA GCTTACTGGC AAGCGTCAAC CGGGTATTAC CGCCACCGAT
ATCGTACTAG CGATTACCGA GTTTCTGCGA AATGAACGCG TGGTTTCATC CTATCTCGAA
TTCTTTGGCG AAGGGGCGCG AGACCTAACC ATTGGCGACC GCGCAACCAT CTCAAACATG
ACGCCAGAAT ACGGCGCAAC CGCCGGGATG TTCTACATTG ATGAGCAGAC CATTAATTAC
CTCAAACTGA CAGGGCGCGA TGATCAACAG GTCGACTTGG TAGAGAAGTA CGCCAAGCAA
ACCGGTCTGT GGGCGGATGA TTTAGATACT GCCGTGTACG AACGCGTGCT TGAGTTCGAT
TTGTCCCAAG TCGGGCGCAA TTTGGCAGGC CCATCTAATC CTCATCGTCG TTTACCCACC
TCAGAGCTTG CTGAACGTGG TGTTTCTGGC GAGTGGCAAG AGAAGGAAGG CGAACTTCCA
GATGGCGCGG TGATCATTGC GGCGATTACT TCTTGCACCA ACACCAGTAA CCCAAGAAAC
GTTGTGGCAG CAGGTCTGGT CGCTAAGAAA GCGAATGAGC TTGGATTGGT GCGCAAACCT
TGGGTGAAGT CTTCATTTGC TCCGGGTTCT AAAGTTGCTC GACTCTACCT TGAAGAATCT
GGCTTACTCC CTGAATTGGA GAAGCTTGGT TTTGGTATCG TGGCTTATGC GTGTACAACC
TGTAACGGTA TGAGCGGCGC ACTTGACCCG AAAATCCAAC AAGAAATCAT CGACCGAGAT
CTGTATTCAA CGGCGGTACT TTCAGGGAAT CGCAACTTTG ATGGTCGAAT TCATCCTTAC
GCAAAACAAG CATTCTTAGC ATCGCCACCT TTGGTTGTTG CATACGCGTT AGCCGGTACG
ATTCGTTTTG ATATCGAACG TGATTATTTA GGCACAGACA AACACGGCAA GCCGGTTTAT
CTCAACGACT TGTGGCCAAC GGATGAAGAA ATTGATGCTG TGGTGGGTGA GTACGTTAAG
CCAGAGCAGT TTAATCAAGT CTACATTCAA ATGTTTAAAC TGAATGATGA GGCTCGTAAC
CCGAATCCGC TCTACGATTG GCGTCCGATG AGTACGTATA TCCGAAGACC TCCTTACTGG
AAAAAAGAGG GGGAAGGTGC TCTAGCAGGT GAGCGAACTC TGTCTTCAAT GCGTCCTCTC
GCCGTTTTAG GCGATAACAT TACGACCGAT CATTTGTCGC CATCGAACGC AATTTTGGCA
AGCAGCGCCG CAGGTGAATA CCTCGCTAAG ATGGGTGTGC CAGAAGAAGA CTTTAACTCA
TACGCGACTC ACCGAGGTGA TCACTTAACC GCGCAGCGCG CCACTTTCGC TAACCCGAAG
TTGTTCAACG AAATGGTCAA GGAAAATGGC GAAGTCGTGC AAGGATCGCT GGCGAGAGTC
GAACCTGAAG GCAAAGTGAC ACGCATGTGG GAAGCGATAG AGACTTACAT GAATCGCAAG
CAGCCGCTTA TCGTGGTCGC AGGTGCGGAT TATGGTCAAG GATCGTCGCG AGATTGGGCT
GCGAAAGGCG TTCGCTTAGC GGGTGTAGAA GCCATTGTCG CTGAAGGGTT TGAGCGTATC
CACCGTACCA ATTTAGTTGG CATGGGCGTA CTTCCTCTGC AATTTAAAGA TGGCGTGAAC
CGAAAGACAC TCGAATTGGA TGGCACTGAA CTTTATGACG TTATCGGCGA TATCACTCCT
GGTGCTGATT TGGCGTTGGT GATTACCCGT GCTAATGGCG ACAAGGTTGA TGTGCCGGTG
ACTTGTCGAC TCGATACCGA AGATGAAGTT AACGTTTACA AAGCGGGTGG TGTGTTACAG
CGCTTTGCTC AAGACTTCCT CTCGCAATAG
|
|---|
| Protein sequence | MSITTNINTQ YRKPLPGTQL DYFDTREAVN DISPGAYEKL PYTSRVLAEQ LVRRCDPNTL
TDSLKQLIER KRDLDFPWYP ARVVCHDILG QTALVDLAGL RDAIAEQGGD PAKVNPVVET
QLIVDHSLAV EHAGFDSEAF EKNRAIEERR NEDRFHFIEW CKTAFENVSV IPAGNGIMHQ
INLEKMSPVV QAKQGIAYPD TCVGTDSHTP HVDSLGVIAI GVGGLEAETV MLGRPSMMRL
PDIVGVKLTG KRQPGITATD IVLAITEFLR NERVVSSYLE FFGEGARDLT IGDRATISNM
TPEYGATAGM FYIDEQTINY LKLTGRDDQQ VDLVEKYAKQ TGLWADDLDT AVYERVLEFD
LSQVGRNLAG PSNPHRRLPT SELAERGVSG EWQEKEGELP DGAVIIAAIT SCTNTSNPRN
VVAAGLVAKK ANELGLVRKP WVKSSFAPGS KVARLYLEES GLLPELEKLG FGIVAYACTT
CNGMSGALDP KIQQEIIDRD LYSTAVLSGN RNFDGRIHPY AKQAFLASPP LVVAYALAGT
IRFDIERDYL GTDKHGKPVY LNDLWPTDEE IDAVVGEYVK PEQFNQVYIQ MFKLNDEARN
PNPLYDWRPM STYIRRPPYW KKEGEGALAG ERTLSSMRPL AVLGDNITTD HLSPSNAILA
SSAAGEYLAK MGVPEEDFNS YATHRGDHLT AQRATFANPK LFNEMVKENG EVVQGSLARV
EPEGKVTRMW EAIETYMNRK QPLIVVAGAD YGQGSSRDWA AKGVRLAGVE AIVAEGFERI
HRTNLVGMGV LPLQFKDGVN RKTLELDGTE LYDVIGDITP GADLALVITR ANGDKVDVPV
TCRLDTEDEV NVYKAGGVLQ RFAQDFLSQ
|
|---|
| |