Gene VIBHAR_02379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02379 
Symbol 
ID5553568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2387013 
End bp2388323 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content45% 
IMG OID640907865 
Producthypothetical protein 
Protein accessionYP_001445568 
Protein GI156974661 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01844] type I secretion outer membrane protein, TolC family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGTGGA CTCGTGCCAA CGCCTTTTGC TTAGGTGTGC TCGCGACTAG CCCTGTTTTT 
GGGCAAACTT TAGAGCAAGC AGTAGAAAAT GCACTTAAGA CAAACCCTGA CATTAAAAGT
GCGTTTAATG AATTCGTGAG TAAGCAGTAT GTGAATGAAG CCTCGAGCGG CGCTTACCTC
CCTTCGGTAG ATCTTGATGC CGGAATTGGG TACGAAGGTA TTGACCCAGC AGAAGCTGGT
AGAGAGTCAA CCGATCTGAC TCGAAAAGAG GCAACCGTAA CGCTCACTCA GTTGATTTGG
GATGGCTCTG CGACACTAAA CGATATTGAT AGAACGGCTG CAGATGCTGA GTCTGTGCGA
TTTCAGTTGC TTGCAGACGC TCAAGACACT GCACTTGAAG TTTCTAAAGT ATATTTAGAC
GCGGTGAAAG CATACGAAAT TCTAACGCTT TCGGAGAACA ACCTGAAAGT GCATAAAAAA
ATCTACCAAG ACATCAAAAA ACGAGTTGAT TCTGGTATTG GCTCAACAGC TGACTTAACA
CAAGTAGAGG CACGTTTAGC TAAAGCGCAC GGAAACCTAG CCGCTGCGCA AAATAACCTA
TTCGACAGCC ACACTATGTT TACTCGCATT GTTGGTCAAA TACCCCAAGG CTTGATATTT
CCTCGTGCAG ATCAAAACTT CATCCCTTAC ACAATAGATA ATGCGATCGA CTTGGCATTT
CAAACTCATC CTGTCATTCA AATTTCAATA GCAGATGTGG ATTCTGCGAA GTTCCAATAT
AAGCAATCGA AAGGCACTTA CTTCCCAACA CTGTCTGTTG AAGCTGCACA AACGTGGCGA
GATGATGCTG GAGGTATTGA AGGCCGTGGT GATGAAACGA CAGCCATGCT CCGTATGCGC
TACAACCTAT TTAATGGTGG CAGTGACGCA GCCAACGCCG AGAGCTTTGC TTACCAGCTA
AATAAAGCGA AAGATCTGCG CGAACGTGCT TATCGCAATG TTGAAGAAGG TTTGAGACTA
TCTTGGAGTG CTTTGGACCT TACTAAACAA CAGAAACAGT TCTTGTCTGA TCACGTTGAT
TCTGCATCTC AAACCGTTAT CGCGTATGAA AAACAATACC GTATCGGCAA GCGCACCCTA
CTCGACTTGT TAAACACCGA AAACGAACTT TTTGAAGCTC GTAAAGACTA TTTAGATGCA
AAATACGCCG AGCAATACGC CAAGTATCGA GTCATGAACG CGACAGGTCA GTTACTCAAC
GCATTACGTG TTGATGTCCC AACCGAGTGG AATCAGAAGG TGGAGTACTA A
 
Protein sequence
MKWTRANAFC LGVLATSPVF GQTLEQAVEN ALKTNPDIKS AFNEFVSKQY VNEASSGAYL 
PSVDLDAGIG YEGIDPAEAG RESTDLTRKE ATVTLTQLIW DGSATLNDID RTAADAESVR
FQLLADAQDT ALEVSKVYLD AVKAYEILTL SENNLKVHKK IYQDIKKRVD SGIGSTADLT
QVEARLAKAH GNLAAAQNNL FDSHTMFTRI VGQIPQGLIF PRADQNFIPY TIDNAIDLAF
QTHPVIQISI ADVDSAKFQY KQSKGTYFPT LSVEAAQTWR DDAGGIEGRG DETTAMLRMR
YNLFNGGSDA ANAESFAYQL NKAKDLRERA YRNVEEGLRL SWSALDLTKQ QKQFLSDHVD
SASQTVIAYE KQYRIGKRTL LDLLNTENEL FEARKDYLDA KYAEQYAKYR VMNATGQLLN
ALRVDVPTEW NQKVEY