Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02379 |
Symbol | |
ID | 5553568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 2387013 |
End bp | 2388323 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640907865 |
Product | hypothetical protein |
Protein accession | YP_001445568 |
Protein GI | 156974661 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGTGGA CTCGTGCCAA CGCCTTTTGC TTAGGTGTGC TCGCGACTAG CCCTGTTTTT GGGCAAACTT TAGAGCAAGC AGTAGAAAAT GCACTTAAGA CAAACCCTGA CATTAAAAGT GCGTTTAATG AATTCGTGAG TAAGCAGTAT GTGAATGAAG CCTCGAGCGG CGCTTACCTC CCTTCGGTAG ATCTTGATGC CGGAATTGGG TACGAAGGTA TTGACCCAGC AGAAGCTGGT AGAGAGTCAA CCGATCTGAC TCGAAAAGAG GCAACCGTAA CGCTCACTCA GTTGATTTGG GATGGCTCTG CGACACTAAA CGATATTGAT AGAACGGCTG CAGATGCTGA GTCTGTGCGA TTTCAGTTGC TTGCAGACGC TCAAGACACT GCACTTGAAG TTTCTAAAGT ATATTTAGAC GCGGTGAAAG CATACGAAAT TCTAACGCTT TCGGAGAACA ACCTGAAAGT GCATAAAAAA ATCTACCAAG ACATCAAAAA ACGAGTTGAT TCTGGTATTG GCTCAACAGC TGACTTAACA CAAGTAGAGG CACGTTTAGC TAAAGCGCAC GGAAACCTAG CCGCTGCGCA AAATAACCTA TTCGACAGCC ACACTATGTT TACTCGCATT GTTGGTCAAA TACCCCAAGG CTTGATATTT CCTCGTGCAG ATCAAAACTT CATCCCTTAC ACAATAGATA ATGCGATCGA CTTGGCATTT CAAACTCATC CTGTCATTCA AATTTCAATA GCAGATGTGG ATTCTGCGAA GTTCCAATAT AAGCAATCGA AAGGCACTTA CTTCCCAACA CTGTCTGTTG AAGCTGCACA AACGTGGCGA GATGATGCTG GAGGTATTGA AGGCCGTGGT GATGAAACGA CAGCCATGCT CCGTATGCGC TACAACCTAT TTAATGGTGG CAGTGACGCA GCCAACGCCG AGAGCTTTGC TTACCAGCTA AATAAAGCGA AAGATCTGCG CGAACGTGCT TATCGCAATG TTGAAGAAGG TTTGAGACTA TCTTGGAGTG CTTTGGACCT TACTAAACAA CAGAAACAGT TCTTGTCTGA TCACGTTGAT TCTGCATCTC AAACCGTTAT CGCGTATGAA AAACAATACC GTATCGGCAA GCGCACCCTA CTCGACTTGT TAAACACCGA AAACGAACTT TTTGAAGCTC GTAAAGACTA TTTAGATGCA AAATACGCCG AGCAATACGC CAAGTATCGA GTCATGAACG CGACAGGTCA GTTACTCAAC GCATTACGTG TTGATGTCCC AACCGAGTGG AATCAGAAGG TGGAGTACTA A
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Protein sequence | MKWTRANAFC LGVLATSPVF GQTLEQAVEN ALKTNPDIKS AFNEFVSKQY VNEASSGAYL PSVDLDAGIG YEGIDPAEAG RESTDLTRKE ATVTLTQLIW DGSATLNDID RTAADAESVR FQLLADAQDT ALEVSKVYLD AVKAYEILTL SENNLKVHKK IYQDIKKRVD SGIGSTADLT QVEARLAKAH GNLAAAQNNL FDSHTMFTRI VGQIPQGLIF PRADQNFIPY TIDNAIDLAF QTHPVIQISI ADVDSAKFQY KQSKGTYFPT LSVEAAQTWR DDAGGIEGRG DETTAMLRMR YNLFNGGSDA ANAESFAYQL NKAKDLRERA YRNVEEGLRL SWSALDLTKQ QKQFLSDHVD SASQTVIAYE KQYRIGKRTL LDLLNTENEL FEARKDYLDA KYAEQYAKYR VMNATGQLLN ALRVDVPTEW NQKVEY
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