Gene VIBHAR_02357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02357 
Symbol 
ID5555777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp2360666 
End bp2361718 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content46% 
IMG OID640907843 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001445546 
Protein GI156974639 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATTA AAACAGATGA ATTGAGAACC CAACCTTTGG GTCCGATGCC GACACCCGCA 
GAGCTAGGTA GCGTACATCC AATTACCGAT GACGTCGCTG ACCGTATCGC TCAATCTCGT 
CGTCAAATTG AGAAGATTTT AACTGGTGAG GATGACCGTA TCCTTGCTAT TGTTGGCCCA 
TGTTCGGTGC ATGACACTGA AGCGGCAATT GACTACGCAA CTCGCCTTGC GAACATTCAA 
GATAAGTACA AAGATGAACT GTTCATCGTA ATGCGTACTT ACTTTGAAAA ACCTCGTACC 
GTTGTTGGTT GGAAAGGCCT AATCACGGAC CCTAACCTAG ATGGTTCCTA CGCGCTTGAA 
GCTGGCCTTC ACAAAGCACG CAAACTGCTA CTGGATATCA ACAAGCTTGG GCTTGCGACT 
GCTACTGAGT TTCTTGATAT GATCACAGGC CAGTACATTG CTGATCTAAT CACGTGGGGC 
GCAATTGGTG CTCGTACAAC AGAATCGCAA ATCCACCGTG AAATGGCCTC TGCGCTGTCT 
TGCCCAGTTG GCTTTAAGAA CGGTACAAAC GGCAATGTGA AAATCGCGAT CGACGCGATT 
CGTGCGTCAA AAGCATCACA CTACTTCTAC TCTCCAGACA AGAATGGTCG CATGACGGTT 
TACCGCACAA GTGGTAACCC ATACGGTCAT ATCATTCTTC GTGGTGGTGA GAAAGGTCCT 
AACTTTGATG AAGCATCTGT TAAACAAGCG TGCGAAGCTC TGGCAGAGTT CGACTTGCCA 
CAACGTTTGA TTGTAGACTT CAGCCATGCG AACTGTCAGA AACAGCACCG CAAGCAAATT 
GAAGTTGCAC AAGACATTTG TGATCAAATT AAATCAGGCA GCACTCGCAT TGCGGGTATC 
ATGGCGGAAA GCTTCATCAT TGAAGGCAAT CAGCCAATGA CTGATATTCA CAACTTAACT 
TACGGTCAAT CTATCACTGA CCCATGTCTG AGTTGGGATG ATACTGTAAC TATGCTAGAT 
ATGCTGGCAG AAGCAGTAAA ATCCAGTAAG TAA
 
Protein sequence
MPIKTDELRT QPLGPMPTPA ELGSVHPITD DVADRIAQSR RQIEKILTGE DDRILAIVGP 
CSVHDTEAAI DYATRLANIQ DKYKDELFIV MRTYFEKPRT VVGWKGLITD PNLDGSYALE 
AGLHKARKLL LDINKLGLAT ATEFLDMITG QYIADLITWG AIGARTTESQ IHREMASALS 
CPVGFKNGTN GNVKIAIDAI RASKASHYFY SPDKNGRMTV YRTSGNPYGH IILRGGEKGP 
NFDEASVKQA CEALAEFDLP QRLIVDFSHA NCQKQHRKQI EVAQDICDQI KSGSTRIAGI 
MAESFIIEGN QPMTDIHNLT YGQSITDPCL SWDDTVTMLD MLAEAVKSSK