| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02352 |
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| Symbol | yebU |
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| ID | 5555788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 2355534 |
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| End bp | 2357039 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640907838 |
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| Product | rRNA (cytosine-C(5)-)-methyltransferase RsmF |
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| Protein accession | YP_001445541 |
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| Protein GI | 156974634 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCTAT TCGTTTCTGA CCCGCTTTCG TATATTATTT GCAGCAAATT CTGCAATCGA
GATTTCACTT TGCATCCTAA TGTTTACATC CCAGAAGCTT TTCTGGAAAA AATCCAAACT
ATCCTCCCTG CTCACCTCAA CATGGAAGAC TTTATCGCGT CATGCCAAAA GCCACTGCGC
AAAAGTATTC GTGTTAATAC GCTCAAGATT AGCGTAGAAG CGTTTCTCGA ACGTGCTGAA
GCAAAAGGTT GGAAGCTTTC ACCTGTACCT TGGTGTAATA CGGGTTTTTG GATCGAAGCG
GATGAGTCGG TTGTGCCACT TGGTAATACT GCTGAACACA TGTCAGGGCT ATTTTACATT
CAAGAAGCCA GCTCAATGAT GCCGGTATCG GCTTTGTTTA TGAATGACGA GTCGTACGAT
GCCGTTCTTG ATACCGCAGC TGCGCCCGGT TCAAAAACGA CTCAAATCGC TGCGCTTATG
AATAACGAAG GCGTGTTGGT AGCGAACGAA TACGCAGCAA GTCGTGTAAA AGTGCTACAC
GCTAACATTG AACGTTGTGG TGTACGTAAT GCAGCATTAA GCAACTTCGA TGGTCGCGTA
TTTGGCGGTT GGTTACCGGA ACAGTTTGAT GCTGTTTTAC TCGACGCGCC ATGTTCAGGG
GAAGGTACCG TTCGTAAAGA CGAAGATGCA ATGAAGAACT GGACGCAATC GTCGGTTGTT
GAGATTGCAG ATACGCAGAA AGATCTGATT GAAAGTGCGT TCCATGCTCT AAAACCTGGC
GGCGTTATGG TTTATTCAAC CTGCACGCTG AGTACCGAAG AGAACCAACA GGTTTGCCAT
CACCTTAAAG AGACATTTGG TGACGCGGTT GAATTCGAAA GCTTAAAAGA TCTGTTTGAA
AATGCAGAAG CGGCGTTAAC TGAAGAAGGT TTCTTGCATA TCTTCCCCCA AGTTTATGAC
TGTGAGGGCT TCTTCGTCGC CCGCATTCGT AAACTTACAG CAGTTGAAGC GCCGAAAGTG
AAAAAGCGCA TGGGTAAATT CCCATTTTCG AAAGCGTCAA ACAAAGAGTC AGCAGAGATT
GCTAAACAGC TACAAAATAC GATGGATATC AAAGTGCCTG AAGACAGCAC AGTTTGGATT
CGCGAGAAAG ATGTTTGGCT TTTCCCTGAC GCGCTAGAGC CAATGATTGG TGAACTGCGT
TTCTCTCGTA TGGGTATCAA AATTGCTGAA GCACACAAGA ACGGTTACCG CTGGCAACAT
CAAGTCGCAA CGGCTCTAGC TACCGGTGAT GAGAAAAATG CTATTGAGTT AACGATTGAA
GAAGCGCGCG AGTGGTACAT GGGTCGCGAT GTTCGCCCAC AAAACATTCC AGCAGATATG
AAGACAGGTA AAGGCGAAGT GTTCGTTAAG TACGAAGGTG CGATCATTGG TCTTGGGAAA
TGGGTAAGCA ACCGAATTAA AAACGGTCTG CCACGTGAAC TTGTGCGTGA TAAGAACTTA
TTTTAG
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| Protein sequence | MWLFVSDPLS YIICSKFCNR DFTLHPNVYI PEAFLEKIQT ILPAHLNMED FIASCQKPLR
KSIRVNTLKI SVEAFLERAE AKGWKLSPVP WCNTGFWIEA DESVVPLGNT AEHMSGLFYI
QEASSMMPVS ALFMNDESYD AVLDTAAAPG SKTTQIAALM NNEGVLVANE YAASRVKVLH
ANIERCGVRN AALSNFDGRV FGGWLPEQFD AVLLDAPCSG EGTVRKDEDA MKNWTQSSVV
EIADTQKDLI ESAFHALKPG GVMVYSTCTL STEENQQVCH HLKETFGDAV EFESLKDLFE
NAEAALTEEG FLHIFPQVYD CEGFFVARIR KLTAVEAPKV KKRMGKFPFS KASNKESAEI
AKQLQNTMDI KVPEDSTVWI REKDVWLFPD ALEPMIGELR FSRMGIKIAE AHKNGYRWQH
QVATALATGD EKNAIELTIE EAREWYMGRD VRPQNIPADM KTGKGEVFVK YEGAIIGLGK
WVSNRIKNGL PRELVRDKNL F
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