Gene VIBHAR_02347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02347 
Symbol 
ID5555741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2348462 
End bp2349124 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content45% 
IMG OID640907833 
Productputative solute/DNA competence effector 
Protein accessionYP_001445536 
Protein GI156974629 
COG category[T] Signal transduction mechanisms 
COG ID[COG3109] Activator of osmoprotectant transporter ProP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGCG GAAATCCGCT CAAACCAGGA ACCCTCATGA CTGAAAAGTT AAAAAACAGC 
AAAGAAGTTA TCGCATACAT TGCTGAATGT TTCCCTAAGT GCTTTACTTT AGAAGGTGAA 
GCAAAGCCTC TGAAAATTGG TATTTTTCAA GATCTTGCGG AACGTCTAAA TGAAGACGAA 
AAAGTAAGCA AAACTCAGCT TCGTGCAGCG TTAAGACAGT ACACTTCATC ATGGCGTTAC 
CTACACGGTG TAAAACCAGG TGCGGTACGT GTTGACCTAG ATGGCAACCC ATGTGGTGAG 
CTAGAAGAAG AACACGTAGA ACACGCTAAA GCGACACTTG CTGAAAGCAA AGCGAAGGTT 
CAAGCTCGTC GTAAAGAGCA AGCTCAAAAA GCTCGCGAAG AGGGTAAGGC GAAAGTAAAA 
CCTGCGGCTA AGAAGCCACA ACAGCCTCGT CGTGCTAACA AACCAAAAGT ACAAAAAGAA 
AGCAAGCCTG TAGAAACACG CGCACTAAAC GCTGACGAAA TCACAATCGG CAACGCAGTT 
AACGTGAATA TGGGCAAAGG AAACATGGCA GCGACCATTG TTGAAGTCAA TAAGGATGAT 
GTACGTGTTC AACTTGCTAA CGGCCTACAA ATGGTTGTGA AAGCGGAGCA CTTGCGCGCA 
TAA
 
Protein sequence
MLRGNPLKPG TLMTEKLKNS KEVIAYIAEC FPKCFTLEGE AKPLKIGIFQ DLAERLNEDE 
KVSKTQLRAA LRQYTSSWRY LHGVKPGAVR VDLDGNPCGE LEEEHVEHAK ATLAESKAKV 
QARRKEQAQK AREEGKAKVK PAAKKPQQPR RANKPKVQKE SKPVETRALN ADEITIGNAV 
NVNMGKGNMA ATIVEVNKDD VRVQLANGLQ MVVKAEHLRA