| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02342 |
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| Symbol | |
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| ID | 5555710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 2336071 |
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| End bp | 2340927 |
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| Gene Length | 4857 bp |
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| Protein Length | 1618 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640907828 |
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| Product | glutamate dehydrogenase |
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| Protein accession | YP_001445531 |
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| Protein GI | 156974624 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGAGTG TGAATATGAC CGCGCGTGAA AATGTAGTGC CGGTTCTGCT TGAAAAGGTA
TACCAACTAA TTCAAGACAA ACTCGAGCTT TCTCACCAAC CGCTTGTAAC TAAACTTGCT
CAACACTTAT TTAGTAACAT TGCTGATGAT GACTTAATTA AGCGAAACGA ATCCGACCTT
TATGGTGCTG TTGTTAGCCT GTGGCACCAC GTCAATGAAA AGAAACCAGA AGATATTTCT
GTCAGGGTAT TCAACCCGAC TGTCAGCCGC CAAGGTTGGC AATCAACTCA CACTATTGTT
GAAATTGTTG TACCGGATAG CCCGTTTTTG GTGGATTCCA TCAAGATGGC GCTAACGCGA
CTCGACCTTG TTTCTCACTT AATGCTCAAC AACCCAACGC AACTAGAACG CGATAAGAAA
GGGCAAGTGA CGGACGTAAA TGGCGAGGGC GGCGTTCTAC AATCTTTATT CCACATCGAA
GTAGACCGTT TAACCAGTAA AGATGAAATG CAAGCGCTGA AAAATGAGTT GCTAACCATC
TTATCAGACA CGCGCTTAGT CGTTGATGAA TGGAAGCAAA TGGTTGAAAA ACTTAAGATC
GTTACCAACG ACCTTGAGAA GAATAAAGAT CGTGTTTCAA TGAAAACAGA TCGTTTAGAT
GAAACGATCG AATACCTACG CTGGTTAGGG GATCATAACT TCACCTTCAT GGGCTATAAG
GAATATGATC TTGTTAACGT CAACGGTGAC ACTGAACTCC AGCCGGTGAA AGAGAAAGGC
CTTGGCATGT TTGCTGATGA CAGTCGTGTT CGCAGCATCA AGCTTTCTGA ACTGTCAGAC
TCTGCGCGCC TTGAAGCGAA AAAACCTTAC GCGCTGATCA TCACTAAGGG CAATCAGGCC
TCTCGTATTC ACCGCCCAGC TTACACTGAC TACATTGGTG TTAAGAAATT CGACAAGAAT
GGCAAAGTGA TTGGTGAGCA CCGTTTCACA GGTCTTTACA CTTCTGCTGT ATACAACCAA
GCCGTACAAA GTATTCCTCT GATCCGCGAG AAAGTGGATC GTATTCTAGA AGCGAGTGGC
TACCGTAACG GATCATACTC GTACAAAGCC CTGCACAACA TTCTAGAAAA CTACCCACGT
GACGAGTTGC TTCAAGCTCG TGAAGAAGAG CTATTAGAAG TGGGGATGGG CGTCGTGCAA
ATGCAAGATC GTGATTTGTT GCGTCTATTT GTTCGTAAAG ACCCGTTTGG TCGATTCTTC
AGCTGCATGG TTTACGTGAC AAAAGATCGT TACAACACCG AGCTTCGCCG CCAAACCCAA
CGCATTCTTA AGCAGTACTT CGGTTGCGAG CAAGAAGTTG AATTCACAAC CTTCTTCTCA
GAAATCCCGC TGGCGAGAAC CCATTACATT GTTCGTGTAG ACAATAACAA CATTGATGTA
GACGTGAAAA AGATTGAGCA GAACTTAATG GAAGTATCGA CTTCATGGGA TGACCGCCTA
AAAGAATCCA TCATTGCAAA CTTTGGTGAG AGTAAAGGTC TTCCACTTTC GAAAGAGTAC
ATGAGCGCAT TCCCACGTTC ATATAAAGAA GACATGATGC CAGGTTCTGC GGTTGCAGAC
ATCGAACGCC TAGAAGCGTT AAGCGATGAT AACAAGCTTG GAATGTTGTT CTACCGTCCG
CAAGAAGAAG CGGCAGAATC GAAAGCGGTG CGTTTAAAGC TATACCACCG CGACGAGCCA
ATTCACCTAT CTGACGTGAT GCCAATGTTG GAAAACCTAG GCTTACGCGT GATCGGCGAA
TCACCTTATG AGATCGAAAC AAACAACGGC CAAACGTTTT GGATTTTAGA CTTCTCAATG
CTGCATAAGA GCGACAAGAC CGTTGATCTT CGTGAAGCTC GCGATCGTTT CCAACAAGCA
TTTGCAGCGA TTTGGGCTGG TAACTTAGAA AGTGATGGCT TCAACCGTTT GGTACTAGGC
GCTTCACTGT CTGGTCGTGA AATCTCAATC CTTCGTGCAT ACGCGCGTTA CATGCGCCAA
GTTGGCTTCC CATTCAGTCA ACAATATATC GAAGATACTC TCAGCCATTA CCCGGATTTA
GCTACGGGTC TCGTTAACCT GTTTGCTAAG CGATTCGATC CAAAACATAA GGGCAGTGAG
AAAGGTCAGA ACGATCTCAT TAAGAAGATT ACTGAAGAAT TGGATCGTGT GGAAAGCTTG
GATGATGATC GTATTATCCG TCGCTACATG GAAATGATCA CAGCAACGCT TCGTACTAAC
TACTACCAGC TGGACGAAGA TAAGCAGCCT AAACCTTGGT TATCATTGAA GATGAAGCCA
AGCGAAATAC CAGATATTCC TCAACCTGTA CCTGCATTTG AAATCTTTGT GTACGCACCG
GATATCGAAG GTGTGCACCT ACGAGGCGGT AAAGTCGCAC GTGGTGGTTT GCGTTGGTCA
GACCGTCAAG AAGACTTCCG TACGGAGATT CTTGGACTGG TTAAAGCACA GCAAGTTAAG
AACACGGTTA TTGTCCCTGT GGGTGCAAAA GGTGGCTTCG TATGTAAACG TCAGCACACT
CTAACTAACC GTGATGACAT CTTTGCTGAA GGTCAGCGTT GTTACAAACG CTTCATTCGC
GCGCTTCTTG ATGTTTCCGA TAACATCATC GAAGGTGAAG TTATTCCGCC GAAGAGTGTC
GTACGTCACG ATGAAGACGA CCCATACTTG GTTGTTGCAG CCGATAAAGG TACAGCTACG
TTCTCTGATT TGGCGAACTC AGTGTCGGAT GAGTACAACT TCTGGCTAGG TGATGCGTTT
GCGTCAGGTG GCTCTAACGG TTACGACCAC AAAGCAATGG GTATCACTGC GAAAGGTGGT
TGGGAATCGG TGAAACGCCA CTTCCGTGAA ATGGGCATCA ACTGCCAAAC CACTGACTTC
ACGGCAATTG GTGTTGGTGA TATGGCAGGT GACGTATTTG GTAACGGTAT GCTGCTATCT
AAGCATATTC GTCTGCAAGC TGCGTTTAAC CACATGCACA TCTTCATTGA TCCAAATCCA
GATTCAGCCA CCAGCTGGGT AGAGCGTAAT CGCTTATTCA ATCTGCCACG ATCAAGCTGG
GAAGATTACA ATGCGGAGTT GATCTCACAG GGCGGTGGTA TCTTCTCTCG TCGCTCTAAA
TCGATCCAAC TTACGCCAGA AATCCAAAAA ATGTTGGGTA CGAAGAAAGC GTCTTTAGCA
CCAAATGATC TGATTAAGAT GATCCTGCAA ATGGAAGTGG ATCTCCTTTG GAATGGTGGT
ATCGGTACGT ATGTTAAAGC TTCTAGCGAG ACACACACTG ACGTTGGCGA CCGTGCAAAC
GACGTACTCC GCATCGATGG ACGTGATTTA AAAGCGAAAG TCGTTGGTGA AGGCGGTAAC
TTGGGTATGA CTCAGTTGGG TCGTATCGAA TACGCAACTG CGGGCGGTCG TGTAAATACC
GACTTTGTTG ACAACGTTGG TGGCGTAGAT TGCTCGGACA ATGAAGTAAA CATCAAGATC
TTCTTGAACG GTCTTGTATC GAATGGCGAT CTAACGGTTA AACAACGCAA CCAGATTCTT
GAATCGATGG AAGACGAAGT GGGTGAGATC GTATTGGACG ATGCATATCT CCAGTCTGAG
TCGATTTCTG TGACTGAACA ACAAGGTGTT GTCATCGTTA AAGAGCAAAT CCGCTTTATC
CATACAATGG AGAGGGCAGG GTACTTGGAT CGTGCTCTTG AGTACATTCC TGACGATGAA
ACGCTCATTG AGCGCGAAAA ACAAGGTCTT GGCCTGACAC GTCCTGAGCT TTCGGTTCTG
GTAGCGTACG GTAAGATGGT TCTGAAAGAG CAATTGGTCG CTGACGAAAT TGCAAATGAC
GAATTCCATG GAAAACAATT AGTTGCTTAC TTTCCAAGCG AGTTACGCCG TAACTACAAA
GATCAAATGG TAAACCATCC ACTGCGTGCT GAAATCATCG CAACAGCGCT GGCAAACCAA
ATGGTTAATG AAATGGGCTG TAACTTCGTG ACTCGTCTTC AAGAAGAAAC GGGCGCGAGC
GTGGTTGATA TCGCAAATGC TTACAGTGCA ACCCGTGAAA TCTTTGAACT GGAAGGTATT
CTCAAGCAAA CTCGTGCACT AGATAATGTT GCAACCGCAG AAGCTCAATA TGAGATTATG
TTCTACGTAC GTCGCGCATT ACGCCGTATT TCTCGTTGGT TATTACGTAA CCGTAGCGGT
AAGAGCACAG TAACTGAGCT CGTTGCACTA TATAAAGACG ATGTTCACAC CATTACTGAA
ACACTAGATA CCATGCTAGT TGCATCAGAA GTGGAAGAGC ATAACGAACT TGCTCAGAAA
TGGATTGAGC GTGGAGTAGA AGAGAAGCTG GCTCATCATG TGGCTCGTCT TTCTAGCCTG
CAGTCAGCAC TGGATATCTC AGCAGTGGCA AGTGAAACAG GTAAAACCGT TGAGCAAGCT
TCGAAGCTTT ACTTCAACTT AGGTGACCGT CTATCACTTC ACTGGTTCTT GAAACAAATC
AATGGTCAAG CGGTAGACAA CAACTGGCAA GCTCTTGCTC GTGCGGCGTT CCGTGAAGAT
CTTGATTGGC AACAACGTCA ATTGACAGCT CAAGTTCTAA CTTGTGGTTG CTCAACAGAA
GATCTAGATG TGATGCAAGC GCTAGAAGAT TGGATGACAA CGAATGAGCT GTCACTCCAT
CGTTGGGAAA GCATCTTGAA CGAGTTCAAA GTCGGCTCAG TTCATGAGTT CGCTAAGTTC
TCTGTAGCGC TTCGAGAGTT GGTTCTACTC AACTTAAACT GCTCTTCAAA CGAATAG
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| Protein sequence | MWSVNMTARE NVVPVLLEKV YQLIQDKLEL SHQPLVTKLA QHLFSNIADD DLIKRNESDL
YGAVVSLWHH VNEKKPEDIS VRVFNPTVSR QGWQSTHTIV EIVVPDSPFL VDSIKMALTR
LDLVSHLMLN NPTQLERDKK GQVTDVNGEG GVLQSLFHIE VDRLTSKDEM QALKNELLTI
LSDTRLVVDE WKQMVEKLKI VTNDLEKNKD RVSMKTDRLD ETIEYLRWLG DHNFTFMGYK
EYDLVNVNGD TELQPVKEKG LGMFADDSRV RSIKLSELSD SARLEAKKPY ALIITKGNQA
SRIHRPAYTD YIGVKKFDKN GKVIGEHRFT GLYTSAVYNQ AVQSIPLIRE KVDRILEASG
YRNGSYSYKA LHNILENYPR DELLQAREEE LLEVGMGVVQ MQDRDLLRLF VRKDPFGRFF
SCMVYVTKDR YNTELRRQTQ RILKQYFGCE QEVEFTTFFS EIPLARTHYI VRVDNNNIDV
DVKKIEQNLM EVSTSWDDRL KESIIANFGE SKGLPLSKEY MSAFPRSYKE DMMPGSAVAD
IERLEALSDD NKLGMLFYRP QEEAAESKAV RLKLYHRDEP IHLSDVMPML ENLGLRVIGE
SPYEIETNNG QTFWILDFSM LHKSDKTVDL REARDRFQQA FAAIWAGNLE SDGFNRLVLG
ASLSGREISI LRAYARYMRQ VGFPFSQQYI EDTLSHYPDL ATGLVNLFAK RFDPKHKGSE
KGQNDLIKKI TEELDRVESL DDDRIIRRYM EMITATLRTN YYQLDEDKQP KPWLSLKMKP
SEIPDIPQPV PAFEIFVYAP DIEGVHLRGG KVARGGLRWS DRQEDFRTEI LGLVKAQQVK
NTVIVPVGAK GGFVCKRQHT LTNRDDIFAE GQRCYKRFIR ALLDVSDNII EGEVIPPKSV
VRHDEDDPYL VVAADKGTAT FSDLANSVSD EYNFWLGDAF ASGGSNGYDH KAMGITAKGG
WESVKRHFRE MGINCQTTDF TAIGVGDMAG DVFGNGMLLS KHIRLQAAFN HMHIFIDPNP
DSATSWVERN RLFNLPRSSW EDYNAELISQ GGGIFSRRSK SIQLTPEIQK MLGTKKASLA
PNDLIKMILQ MEVDLLWNGG IGTYVKASSE THTDVGDRAN DVLRIDGRDL KAKVVGEGGN
LGMTQLGRIE YATAGGRVNT DFVDNVGGVD CSDNEVNIKI FLNGLVSNGD LTVKQRNQIL
ESMEDEVGEI VLDDAYLQSE SISVTEQQGV VIVKEQIRFI HTMERAGYLD RALEYIPDDE
TLIEREKQGL GLTRPELSVL VAYGKMVLKE QLVADEIAND EFHGKQLVAY FPSELRRNYK
DQMVNHPLRA EIIATALANQ MVNEMGCNFV TRLQEETGAS VVDIANAYSA TREIFELEGI
LKQTRALDNV ATAEAQYEIM FYVRRALRRI SRWLLRNRSG KSTVTELVAL YKDDVHTITE
TLDTMLVASE VEEHNELAQK WIERGVEEKL AHHVARLSSL QSALDISAVA SETGKTVEQA
SKLYFNLGDR LSLHWFLKQI NGQAVDNNWQ ALARAAFRED LDWQQRQLTA QVLTCGCSTE
DLDVMQALED WMTTNELSLH RWESILNEFK VGSVHEFAKF SVALRELVLL NLNCSSNE
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