Gene VIBHAR_02334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02334 
Symbol 
ID5555643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2324055 
End bp2325788 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content46% 
IMG OID640907820 
Producthypothetical protein 
Protein accessionYP_001445523 
Protein GI156974616 
COG category 
COG ID 
TIGRFAM ID[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTGTA GTAATAAATT CAAACTAACC GCCGTCGCGA TGATGGTTGG TACAGCAATG 
AATGCCAATG CAGCATTGTA TCAGGTGGTT GAAGTAGAGC CAGAATCAAA TGGTGACATC
GTTAATTACG AAACTGCCTA CGGCGTTGCT ATCCAGCAAG GTGATGTTCA GGATGTAAGC
ACTGGTTCAC CGTTTGTCCA TGGTTGTTTT GATTCAGCAG CAGGATGTAC AACGGAACAA
TTCAAATTGG CACTGGAAAC TCGTACAACA CCAATTTCAG CAGGCGAAGC TGTAGATGGT
TTGAGTTACC GTGAAGAAGT GCCTTTTGCA ATGGACTCCG GTTTTTATTA TGTGCAAGAG
TACGACGATT TTGAGCGCTA CTGTTACAAC GAGCGTCGTT ACTCAACATG TGAATCTTGG
GCATCTATTC ATTGGCAACC TTGGGGTAAA GAGCTAGGTA AAGACTTTAC AACAAACGCA
CTCGCATTTG TCGAGAATGA CCCAAGTGCT TATGACAACA AGTACAACAA TATTATCAAT
AGCCTAACTG AAGATGGCAA ACCAGTTGGT AATCAAAGTG TCGTAAGCGA TACAGATTCT
TCTGAATTAG AAACAAGAAA TACTGTTGTT GCTCCATCGC TTCCAACTAT TGTTCCAAGC
AGCGAAGAGG CGATTGTTGT CGGGAGCCGA GCATGGCGCA CCGATGGGAC ATTTACAGTA
GGCAGTATTT CTGAACAAGC ATCAAACGAT AACGGCACGC ACCATACTTC AAAAGCGGCA
ATTTGGGATA AAGACGGTAC AGTCAGTCAA ATTGCTTGGC CTAGTAACTC AGCTAAAGAT
GGTGAGCGTT TAGCTCAAGG TAGCATGCGT GGCATCTTTG AAGATGGGAC AACTGTCTAT
GGTGTTGGTT ACAATACGTA TTCTGATGAT AACTACATGA ATGCGACTGT GTTTGTTGGC
ACCTTAGCTA CTCCTGGTAG CATGACTGGC TCTACTTGGG AGAGCAAGTT AGTAAGTGGG
GCTCAACAAC GTATCGATGG CGACACTGTT CATAGTAACT CTCGTTTAAC GGATGTGAAC
TCTAACTTTG TTGCAATCGG TGAAGCGAAG CGCTCTGGCG CTTACCTAAT GCCGACAGGT
TCTGCGCCTA ACCGTTTGTT TATTGTAAAC GACGTCACTG CAGATTCTGT TAGCGCATTC
TACCCAACAA CCGACATTTT CTTTAGTGGT GCAGGCGGTC ATATGGGGGC TATCAACTCT
TACAATGAGA TTGTTGGTCA ACTAGATGCT GAGACTACTC GTGAAGAAGA AGGTAAGCCT
CGTCGCAAAC GTGGTTTTAT TTACCCTTAC ACTAAAACAG GTGAAGCCGT GAGCCAGCGT
GCGACAGACT TGTTTGAGGG TAAACCATGG TTCTTGGATA ACCTAACGAA CGGTGGTGAA
TACTCAGCGG ACAACAACGC ATTCCGTATC ATCAATGCTA CAGACATCAA TGATGCTGGC
GTTATCTCGG CAACCGCGAT GAAGTGTGAA GGCGGCTATA AGAGCACACA ACATAACGCG
TCGTGTGATG GGACAGAAAA AATCGTTGCA GTTAAGCTTA TGCCTATCGC TGGTGCGACT
TCTGCAGATA TTCAGAAGCG AAGCGTTGAA GAGGAATCTG CCGAACGTCA AGGTGCCGGT
CTTGGTTGGT TGGCTTTGAC CATGCTGGGC TTCTTCGGGT TCCGTAGAAA ATAG
 
Protein sequence
MNCSNKFKLT AVAMMVGTAM NANAALYQVV EVEPESNGDI VNYETAYGVA IQQGDVQDVS 
TGSPFVHGCF DSAAGCTTEQ FKLALETRTT PISAGEAVDG LSYREEVPFA MDSGFYYVQE
YDDFERYCYN ERRYSTCESW ASIHWQPWGK ELGKDFTTNA LAFVENDPSA YDNKYNNIIN
SLTEDGKPVG NQSVVSDTDS SELETRNTVV APSLPTIVPS SEEAIVVGSR AWRTDGTFTV
GSISEQASND NGTHHTSKAA IWDKDGTVSQ IAWPSNSAKD GERLAQGSMR GIFEDGTTVY
GVGYNTYSDD NYMNATVFVG TLATPGSMTG STWESKLVSG AQQRIDGDTV HSNSRLTDVN
SNFVAIGEAK RSGAYLMPTG SAPNRLFIVN DVTADSVSAF YPTTDIFFSG AGGHMGAINS
YNEIVGQLDA ETTREEEGKP RRKRGFIYPY TKTGEAVSQR ATDLFEGKPW FLDNLTNGGE
YSADNNAFRI INATDINDAG VISATAMKCE GGYKSTQHNA SCDGTEKIVA VKLMPIAGAT
SADIQKRSVE EESAERQGAG LGWLALTMLG FFGFRRK