Gene VIBHAR_02318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02318 
Symbol 
ID5555586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2311042 
End bp2312310 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content48% 
IMG OID640907804 
Producthypothetical protein 
Protein accessionYP_001445507 
Protein GI156974600 
COG category[R] General function prediction only 
COG ID[COG4128] Zonula occludens toxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCGC TCGACATTAT CGAGAAACGA CTGGGGGAAA AGTTTCCGGA CAGTGCTCGC 
CTCATTCGTA TCAGCTCGCG TAATCCCGAA GGCTTCGAAC TTTGGAAGTA CTTTTTCTGT
TGGGCTCCGA TTGGCGCCTT CATCCTTATT GATGAATGTC AGCAAATCTT CTCGACCAAC
GCAGGTTTTA AGATGGCCAA CATACACAAG CGCCCTTTCA CTGACTTTGA GTCTCATCTA
CCGGAGGGGT TTTCTGAGTT GTTCCACTCA CGCTGGCTGA CTGTGGACAC ATCAACGCTA
GACAACGGCG AGATAGACGA TTGTCAGCGT ACACGTTTTG ATGAACAAGG ACGGATTATC
TACCCTGAGA ACTTCAACAA CGCTTTCATG GAGCACCGCC ACTACAACTG GGACATTGTT
TTATTAACGC CCGACTTCGC CCAAGTTCCT AAAGAGCTTA AAGGCGTGGC CGAGCTGGCC
AAACAACACA AAGGGAAAGA CGGGATCTTT TTCTCTAACC GTAAGCCTCG AATCTTAGAG
CATGACCCAA CACGAACTGT GACCAAACCA AGCAAAGACG ATGTGGTTTA CAACCTCAAG
GTACCGCTTG ATGTTCACCT GCTCTACGCC TCTACCGTTA CGGGACAAAT CACCAAAGCG
GGTCTTGGAA AGAACATCTT TCTAAACCCT AAATTCCTAG CCGCTATGGC ACTGATAGTA
CTTTCATTTG GGTATATCAC TTATGCAATT ATTAATATGG TTTCTGGTTC TGAGGCGTCA
ATTGAAACAG GAACGCAGCC TTATCAAGCT ACGCAGCAAA ATCCGGTATC GTCTCCACAA
GGTCAAGCTC ATCATCACCA AGGTTCTGCG GGTCATCCTG TCGTGGGTTC TGGTCGTTCT
AACTGTAAGG GTACTGATTG CGGGACTCGG CCTTATCATG ACATAGGCAA CGTTCCGGCT
TGGTTCCCAC TATCCAACTC CGAAAGCATC TATGTGTCTG CGGTTGAGCG TTGGCACAAA
CCCAACTCAA TTCGAGTGAG TGTCCATTTT GAGGTAATAA CACCGAGAGG TGTTAGCTAC
CTCGATGACT CGTTTCTTAA AAAGCTAGGT ATTCAAATGG ATTATCTAGA CGACTGCCTT
GTCCAGCTGT CTAGCGGTGA ATCGAACTTT TACGTGACTT GTTCCCCTTA CGAGCAATTC
GCACAAGTAC AAGAGCAAGA CATAGAACTT AAGCCCGTTG GCGGTATCTT TGGCGGAGAC
GAAACCTAA
 
Protein sequence
MQPLDIIEKR LGEKFPDSAR LIRISSRNPE GFELWKYFFC WAPIGAFILI DECQQIFSTN 
AGFKMANIHK RPFTDFESHL PEGFSELFHS RWLTVDTSTL DNGEIDDCQR TRFDEQGRII
YPENFNNAFM EHRHYNWDIV LLTPDFAQVP KELKGVAELA KQHKGKDGIF FSNRKPRILE
HDPTRTVTKP SKDDVVYNLK VPLDVHLLYA STVTGQITKA GLGKNIFLNP KFLAAMALIV
LSFGYITYAI INMVSGSEAS IETGTQPYQA TQQNPVSSPQ GQAHHHQGSA GHPVVGSGRS
NCKGTDCGTR PYHDIGNVPA WFPLSNSESI YVSAVERWHK PNSIRVSVHF EVITPRGVSY
LDDSFLKKLG IQMDYLDDCL VQLSSGESNF YVTCSPYEQF AQVQEQDIEL KPVGGIFGGD
ET