Gene VIBHAR_02289 details

Gene Information

• Locus tag: VIBHAR_02289
• Symbol: potA
• ID: 5555350
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 2287754
• End bp: 2289034
• Gene Length: 1281 bp
• Protein Length: 426 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640907775
• Product: putrescine/spermidine ABC transporter ATPase protein
• Protein accession: YP_001445478
• Protein GI: 156974571
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components
• TIGRFAM ID: [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAAGGA ATGTTTACTT TTGCCTGCAA AATTTTTTCT GTTTCAAGAT AAGAAAATGC 
TTTGATTTCA CAATTTTGGT GATTATGATG CGCGCCTCAA AAGTGAATGA CTTATGTCAC 
ATCAATTGGA TACAACCCAA TTTGAACGTG GGAGAAATAC AGACGTTGAA CGCTAAACAG 
CAAGCAGGAA AGCCAGTAGT TCGTCTATCT GGTATTAGCA AAAGTTTCGA TGGTAAGGAA 
ATCATCGGTA ATTTAAATCT GGATGTTAAT CATGGTGAGT TTCTGACGAT TCTTGGTCCT 
TCTGGTTGTG GTAAAACAAC GGTTTTACGC ATGATCGCGG GCTTTGAGAC GGCAGATAAC 
GGTCAAATCG TACTAGATGA CCAAGATGTA ACACAGGTTC CTGCAGAGCA AAGGCACGTC 
AACACGGTAT TTCAGAGTTA TGCACTCTTC CCTCATATGA CCGTATTTGA AAACGTTGCA 
TTTGGTCTTC GCATGCAGAA AACACCTGCT GCAGAGATCG AGCCACGAGT TATGGATGCG 
CTACGCATGG TTCGCCTAGA AAAAATGGCA CAGCGTAAGC CTCACCAACT TTCTGGTGGT 
CAGCAACAAC GTATCGCCAT TGCGCGTGCA GTTGTGAACA AACCAAAAGT ACTGCTGCTA 
GATGAATCTC TATCTGCACT TGATTACAAA CTACGTAAGC AAATGCAAAT CGAGCTTAAA 
CAGCTTCAGC GTCAACTTGG TATTACCTTT ATCTTCGTTA CGCACGATCA GGAAGAAGCC 
CTATCGATGT CTGACCGCAT TATTGTTATG CGCGACGGTG TTATTGAACA AGACGGCTCT 
CCGCGTGAGA TCTACGAAGA ACCTAAGAAC CTATTTGTTG CTCGCTTTAT CGGTGAGATC 
AACGTATTTA ACGCTACCAT GCTAGAGCGT ATCGACGAGA AACGTATCCG TGCAGAAATT 
GAAGGCGTTG AATCCGTTGT TTACTACGAT CAAGAAGCAC AATCCGGTGA CAAACTACAA 
GTACTACTTC GCCCAGAAGA CTTACGCATC GAAGAGATCA AAGAGTCTGA AGAAAAAGGC 
ATCGTAGGTC ACGTAACAGA GCGTACCTAT AAAGGTATGA CGCTTGATTC AGTTATCCAG 
TTGGAGTCAG GCATGCGCGT GATGGTGAGC GAATTCTTTA ACGAAGATGA TCCAGATGTG 
GACCACTCCC TCGGCCAGAA AGTCGCTATT ACTTGGGTTG AGAGCTGGGA GGTAGTACTA 
AATGATAAGC AAGAAGCTTA A 

 

Protein sequence

MVRNVYFCLQ NFFCFKIRKC FDFTILVIMM RASKVNDLCH INWIQPNLNV GEIQTLNAKQ 
QAGKPVVRLS GISKSFDGKE IIGNLNLDVN HGEFLTILGP SGCGKTTVLR MIAGFETADN 
GQIVLDDQDV TQVPAEQRHV NTVFQSYALF PHMTVFENVA FGLRMQKTPA AEIEPRVMDA 
LRMVRLEKMA QRKPHQLSGG QQQRIAIARA VVNKPKVLLL DESLSALDYK LRKQMQIELK 
QLQRQLGITF IFVTHDQEEA LSMSDRIIVM RDGVIEQDGS PREIYEEPKN LFVARFIGEI 
NVFNATMLER IDEKRIRAEI EGVESVVYYD QEAQSGDKLQ VLLRPEDLRI EEIKESEEKG 
IVGHVTERTY KGMTLDSVIQ LESGMRVMVS EFFNEDDPDV DHSLGQKVAI TWVESWEVVL 
NDKQEA