Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02288 |
Symbol | potB |
ID | 5556415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 2286913 |
End bp | 2287773 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640907774 |
Product | spermidine/putrescine ABC transporter membrane protein |
Protein accession | YP_001445477 |
Protein GI | 156974570 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGCA AGAAGCTTAA TCTTCAGAAC GCGATCATTA CCCTAATCGT TGGTTGGTTA ACACTGTTTG TGTTAGTACC AAACCTAATG ATTATCGGTA CAAGTTTCTT GACGCGTGAT GAAGCAAACC TAATTGAATT AACGTTTACG TTCGACAACT ACCTTCGCCT ACTCGATCCT TTGTACGCAA AGGTGCTGAT GCACTCTTTC TACATGGCGA TCATTGCAAC GTTGTTGTGT TTGGTGATTG GTTATCCATT TGCTTACATC GTAGCGAAAA TGCCTGAAAA ATGGCGTCCG TTCATGTTGT TCTTGGTGAT TGTACCGTTT TGGACTAACT CTCTTATCCG CACGTACGGC TTAAAGATTG TTCTAGGTAC TCAAGGCATT TTGAATAAGT CGTTGATGGC AATGGAAATC ATCGATAAGC CAATGCGTTT AATGTATACC GAAACAGCAG TAATGATTGG TCTTGTGTAC ATCTTGCTTC CATTTATGAT TTTGCCGCTT TACTCGGCAA TCGAGAAGCT AGACAACACA TACATCGAGG CAGCAAAAGA CCTTGGTGCA AACAAGTTCC AAACCATTAC TAAAGTGATT CTACCTCTGA CAATGCCTGG CATTATCGGT GGCTGTTTGT TGGTTCTACT ACCTGCACTA GGTATGTTCT ACATCTCTGA CCTTCTAGGC GGCGCGAAGA ACCTACTGAT TGGTAACGTG ATTAAGAGCC AAGTATTGAA CGCTCGTGAC TGGCCATTTG GTGCTGCGAC CAGTATCGCC CTCACCTTCG CAATGGCTGT GATGCTTTAC GCTTATTACA GAGCAGGCAA ACTATTGAAT AAGAAAGTGG AGCTAGACTA A
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Protein sequence | MISKKLNLQN AIITLIVGWL TLFVLVPNLM IIGTSFLTRD EANLIELTFT FDNYLRLLDP LYAKVLMHSF YMAIIATLLC LVIGYPFAYI VAKMPEKWRP FMLFLVIVPF WTNSLIRTYG LKIVLGTQGI LNKSLMAMEI IDKPMRLMYT ETAVMIGLVY ILLPFMILPL YSAIEKLDNT YIEAAKDLGA NKFQTITKVI LPLTMPGIIG GCLLVLLPAL GMFYISDLLG GAKNLLIGNV IKSQVLNARD WPFGAATSIA LTFAMAVMLY AYYRAGKLLN KKVELD
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