Gene VIBHAR_02288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02288 
SymbolpotB 
ID5556415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2286913 
End bp2287773 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content43% 
IMG OID640907774 
Productspermidine/putrescine ABC transporter membrane protein 
Protein accessionYP_001445477 
Protein GI156974570 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGCA AGAAGCTTAA TCTTCAGAAC GCGATCATTA CCCTAATCGT TGGTTGGTTA 
ACACTGTTTG TGTTAGTACC AAACCTAATG ATTATCGGTA CAAGTTTCTT GACGCGTGAT
GAAGCAAACC TAATTGAATT AACGTTTACG TTCGACAACT ACCTTCGCCT ACTCGATCCT
TTGTACGCAA AGGTGCTGAT GCACTCTTTC TACATGGCGA TCATTGCAAC GTTGTTGTGT
TTGGTGATTG GTTATCCATT TGCTTACATC GTAGCGAAAA TGCCTGAAAA ATGGCGTCCG
TTCATGTTGT TCTTGGTGAT TGTACCGTTT TGGACTAACT CTCTTATCCG CACGTACGGC
TTAAAGATTG TTCTAGGTAC TCAAGGCATT TTGAATAAGT CGTTGATGGC AATGGAAATC
ATCGATAAGC CAATGCGTTT AATGTATACC GAAACAGCAG TAATGATTGG TCTTGTGTAC
ATCTTGCTTC CATTTATGAT TTTGCCGCTT TACTCGGCAA TCGAGAAGCT AGACAACACA
TACATCGAGG CAGCAAAAGA CCTTGGTGCA AACAAGTTCC AAACCATTAC TAAAGTGATT
CTACCTCTGA CAATGCCTGG CATTATCGGT GGCTGTTTGT TGGTTCTACT ACCTGCACTA
GGTATGTTCT ACATCTCTGA CCTTCTAGGC GGCGCGAAGA ACCTACTGAT TGGTAACGTG
ATTAAGAGCC AAGTATTGAA CGCTCGTGAC TGGCCATTTG GTGCTGCGAC CAGTATCGCC
CTCACCTTCG CAATGGCTGT GATGCTTTAC GCTTATTACA GAGCAGGCAA ACTATTGAAT
AAGAAAGTGG AGCTAGACTA A
 
Protein sequence
MISKKLNLQN AIITLIVGWL TLFVLVPNLM IIGTSFLTRD EANLIELTFT FDNYLRLLDP 
LYAKVLMHSF YMAIIATLLC LVIGYPFAYI VAKMPEKWRP FMLFLVIVPF WTNSLIRTYG
LKIVLGTQGI LNKSLMAMEI IDKPMRLMYT ETAVMIGLVY ILLPFMILPL YSAIEKLDNT
YIEAAKDLGA NKFQTITKVI LPLTMPGIIG GCLLVLLPAL GMFYISDLLG GAKNLLIGNV
IKSQVLNARD WPFGAATSIA LTFAMAVMLY AYYRAGKLLN KKVELD