Gene VIBHAR_02258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02258 
Symbol 
ID5555165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2254303 
End bp2256183 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content38% 
IMG OID640907744 
Producthypothetical protein 
Protein accessionYP_001445447 
Protein GI156974540 
COG category[L] Replication, recombination and repair 
COG ID[COG3593] Predicted ATP-dependent endonuclease of the OLD family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGAC AAATTACAAT ATCTAACTTT CGTTCAATAC GAAAAGAAAC GATATCAGCC 
GAAGAAATTA CTACTCTGGT TGGTAAAAAT GATGCTGGAA AGTCAAACCT CCTACGTGCC
TTAAATCTTT TTTTCAATGG TAAAACAGAT GCAGAGCAAG CCTTTGACTT TAAAGCTGAC
TTTAACATCA ATGCAACAGT ACAACAAAGA AAAGCCAAAG AAATAGTTGT AGAGCTTGTC
CTTAAGCTCC CAAGGAGTTA CAGGAAAGAA GGTAGCCCTG ATACTGTTTA TTGGAAACGC
ACATGGCGAG CAGACGGATT TCATAGTGAA GTTCAACAAC ATTGTGAAAT GCGAAATGGT
CGGATTATTA ATAAGACTGA CTTTCCAAGA CGAAGTAAAA TACCTAACTT ACTGAAAAGT
ATAAATTACA TATATATACC CGCAATAAAA GACGCAGGTT TCTTCCGTGA TCTACAAGGA
CAAATGTACG ATGTTCTTGC TACGGCAACC GAACAGGGGC TACATGCTTC AGCTAATAGT
TTTGAACAAG AGATCAACAC CCATATAAGC GAACTTATGA GGGAGATCGA CGCGACTTTT
GAAAATAGTA ACAACGAAGT AAAACTGCCT CAAAACCTGA GAAATATCTT TGGCGCATTG
GAGTTTAATG CCGATAGCAT CCCTCTATCA CGAAGAGGAG ATGGAATAAA AATAAGGCAC
ATCCCAATGA TGCTATCTTT TATCGCTCTA AAACAACAAA GTATTGGCTC TAGAACCACA
ATTAGACCTC AGATCTGGGG TTTTGAAGAA CCTGAAAACA ACGTTGAATT TTCAACATGC
TTTGAGCTAA ACAATCAACT TGTAGAAGCC GCCAAAAAAC ACACGCAAAT TTTCATTACT
ACGCACTCTC CTGCGATTTA TTCTCTTTCG TTCAACAACA GCCTTCCTTC TGGTATAAAA
AGCGTAAGCT ACTACGTTGA GAAGCATAAA AGCGATACAA AGATAATCTC TTGTGAAGAA
CATGAACTTC ATGGCAACAC CGGATTCTTA AATCTTGTAA CACCAATGAT TGAAGAGCAC
CGGAAAGAGT GGCAATCGCG TGAAAACGAA TACCATGGAA TAGTTAAGGA ACTTAAAACT
CAACTAGAAA ACTCGTCCAA ACCACGTCTT TTCCTCGAAG GAATTAGTGA CAAAATAGTT
TTAAATCGTT TGCTAAGATT TCATAACTTA GAAAACGAAG TTTTTATTGA TACCCCAGAT
AGTGCGCATA ACAGCGCAAA TGCTGCTTGT GACAGAGCTA AAGCTTTCTT TTTAATGCAA
AAACATGAAA AAGATAAAAT CCCAGCCTTG TTACTACTAG ACGACGATGA ATCAGGAAAA
GATGCTAAGA AACAATTGAC GAGCTTCCTG AACGGTTCGA AAGTAAATAT TAATGGCCTG
ACATATCCAC CTAACGAAAC ACCGAAGCAA TTAAAGCTCA AAGGATATGT CTGGAAGGTA
GAGCTAGAGC ACTTGTACCC AGAAAGTATT TGGGAGCTTG CATTTAAAAA TGATTGGATC
GAAAAGATCG AAACAGAAGA GAAAAAGTTT AGTCCAGCAA AACGAGACGA GTTATTCAAC
AAAGGGATAA CACCTCATAA GTATAAAGAG GACTTAACAA CCTACCAGGC GTATTTAGTT
GATTATGCTT TTAGCTTCGA AGGCAAGCGT GCCATTAGTG ATTACATATC AAAAATGTCT
GACCGCGAAC TTGTAGAGAC AGGATTGGTT CAAACTTTCG AACCAGTAAT CGACCTAATT
GCGAAAAAAC TAAAACTCAC CCGAGTCGAA TACGAAGTTA ACGAAGCTAT GGCAGAAAGA
ATGCCCCAAC CAACTCCTTA A
 
Protein sequence
MIRQITISNF RSIRKETISA EEITTLVGKN DAGKSNLLRA LNLFFNGKTD AEQAFDFKAD 
FNINATVQQR KAKEIVVELV LKLPRSYRKE GSPDTVYWKR TWRADGFHSE VQQHCEMRNG
RIINKTDFPR RSKIPNLLKS INYIYIPAIK DAGFFRDLQG QMYDVLATAT EQGLHASANS
FEQEINTHIS ELMREIDATF ENSNNEVKLP QNLRNIFGAL EFNADSIPLS RRGDGIKIRH
IPMMLSFIAL KQQSIGSRTT IRPQIWGFEE PENNVEFSTC FELNNQLVEA AKKHTQIFIT
THSPAIYSLS FNNSLPSGIK SVSYYVEKHK SDTKIISCEE HELHGNTGFL NLVTPMIEEH
RKEWQSRENE YHGIVKELKT QLENSSKPRL FLEGISDKIV LNRLLRFHNL ENEVFIDTPD
SAHNSANAAC DRAKAFFLMQ KHEKDKIPAL LLLDDDESGK DAKKQLTSFL NGSKVNINGL
TYPPNETPKQ LKLKGYVWKV ELEHLYPESI WELAFKNDWI EKIETEEKKF SPAKRDELFN
KGITPHKYKE DLTTYQAYLV DYAFSFEGKR AISDYISKMS DRELVETGLV QTFEPVIDLI
AKKLKLTRVE YEVNEAMAER MPQPTP