Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02258 |
Symbol | |
ID | 5555165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 2254303 |
End bp | 2256183 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640907744 |
Product | hypothetical protein |
Protein accession | YP_001445447 |
Protein GI | 156974540 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAGAC AAATTACAAT ATCTAACTTT CGTTCAATAC GAAAAGAAAC GATATCAGCC GAAGAAATTA CTACTCTGGT TGGTAAAAAT GATGCTGGAA AGTCAAACCT CCTACGTGCC TTAAATCTTT TTTTCAATGG TAAAACAGAT GCAGAGCAAG CCTTTGACTT TAAAGCTGAC TTTAACATCA ATGCAACAGT ACAACAAAGA AAAGCCAAAG AAATAGTTGT AGAGCTTGTC CTTAAGCTCC CAAGGAGTTA CAGGAAAGAA GGTAGCCCTG ATACTGTTTA TTGGAAACGC ACATGGCGAG CAGACGGATT TCATAGTGAA GTTCAACAAC ATTGTGAAAT GCGAAATGGT CGGATTATTA ATAAGACTGA CTTTCCAAGA CGAAGTAAAA TACCTAACTT ACTGAAAAGT ATAAATTACA TATATATACC CGCAATAAAA GACGCAGGTT TCTTCCGTGA TCTACAAGGA CAAATGTACG ATGTTCTTGC TACGGCAACC GAACAGGGGC TACATGCTTC AGCTAATAGT TTTGAACAAG AGATCAACAC CCATATAAGC GAACTTATGA GGGAGATCGA CGCGACTTTT GAAAATAGTA ACAACGAAGT AAAACTGCCT CAAAACCTGA GAAATATCTT TGGCGCATTG GAGTTTAATG CCGATAGCAT CCCTCTATCA CGAAGAGGAG ATGGAATAAA AATAAGGCAC ATCCCAATGA TGCTATCTTT TATCGCTCTA AAACAACAAA GTATTGGCTC TAGAACCACA ATTAGACCTC AGATCTGGGG TTTTGAAGAA CCTGAAAACA ACGTTGAATT TTCAACATGC TTTGAGCTAA ACAATCAACT TGTAGAAGCC GCCAAAAAAC ACACGCAAAT TTTCATTACT ACGCACTCTC CTGCGATTTA TTCTCTTTCG TTCAACAACA GCCTTCCTTC TGGTATAAAA AGCGTAAGCT ACTACGTTGA GAAGCATAAA AGCGATACAA AGATAATCTC TTGTGAAGAA CATGAACTTC ATGGCAACAC CGGATTCTTA AATCTTGTAA CACCAATGAT TGAAGAGCAC CGGAAAGAGT GGCAATCGCG TGAAAACGAA TACCATGGAA TAGTTAAGGA ACTTAAAACT CAACTAGAAA ACTCGTCCAA ACCACGTCTT TTCCTCGAAG GAATTAGTGA CAAAATAGTT TTAAATCGTT TGCTAAGATT TCATAACTTA GAAAACGAAG TTTTTATTGA TACCCCAGAT AGTGCGCATA ACAGCGCAAA TGCTGCTTGT GACAGAGCTA AAGCTTTCTT TTTAATGCAA AAACATGAAA AAGATAAAAT CCCAGCCTTG TTACTACTAG ACGACGATGA ATCAGGAAAA GATGCTAAGA AACAATTGAC GAGCTTCCTG AACGGTTCGA AAGTAAATAT TAATGGCCTG ACATATCCAC CTAACGAAAC ACCGAAGCAA TTAAAGCTCA AAGGATATGT CTGGAAGGTA GAGCTAGAGC ACTTGTACCC AGAAAGTATT TGGGAGCTTG CATTTAAAAA TGATTGGATC GAAAAGATCG AAACAGAAGA GAAAAAGTTT AGTCCAGCAA AACGAGACGA GTTATTCAAC AAAGGGATAA CACCTCATAA GTATAAAGAG GACTTAACAA CCTACCAGGC GTATTTAGTT GATTATGCTT TTAGCTTCGA AGGCAAGCGT GCCATTAGTG ATTACATATC AAAAATGTCT GACCGCGAAC TTGTAGAGAC AGGATTGGTT CAAACTTTCG AACCAGTAAT CGACCTAATT GCGAAAAAAC TAAAACTCAC CCGAGTCGAA TACGAAGTTA ACGAAGCTAT GGCAGAAAGA ATGCCCCAAC CAACTCCTTA A
|
Protein sequence | MIRQITISNF RSIRKETISA EEITTLVGKN DAGKSNLLRA LNLFFNGKTD AEQAFDFKAD FNINATVQQR KAKEIVVELV LKLPRSYRKE GSPDTVYWKR TWRADGFHSE VQQHCEMRNG RIINKTDFPR RSKIPNLLKS INYIYIPAIK DAGFFRDLQG QMYDVLATAT EQGLHASANS FEQEINTHIS ELMREIDATF ENSNNEVKLP QNLRNIFGAL EFNADSIPLS RRGDGIKIRH IPMMLSFIAL KQQSIGSRTT IRPQIWGFEE PENNVEFSTC FELNNQLVEA AKKHTQIFIT THSPAIYSLS FNNSLPSGIK SVSYYVEKHK SDTKIISCEE HELHGNTGFL NLVTPMIEEH RKEWQSRENE YHGIVKELKT QLENSSKPRL FLEGISDKIV LNRLLRFHNL ENEVFIDTPD SAHNSANAAC DRAKAFFLMQ KHEKDKIPAL LLLDDDESGK DAKKQLTSFL NGSKVNINGL TYPPNETPKQ LKLKGYVWKV ELEHLYPESI WELAFKNDWI EKIETEEKKF SPAKRDELFN KGITPHKYKE DLTTYQAYLV DYAFSFEGKR AISDYISKMS DRELVETGLV QTFEPVIDLI AKKLKLTRVE YEVNEAMAER MPQPTP
|
| |