Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_02224 |
Symbol | |
ID | 5554104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 2223402 |
End bp | 2224823 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640907711 |
Product | hypothetical protein |
Protein accession | YP_001445414 |
Protein GI | 156974507 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAAG CTATGACGAA TATGTCACTT TTTGCCGTTG CGTTGGTGAT CAATAAAAGC ATTAGCCTCA TTATGCTGCC TGTACTTCCG CAATTTTTGG CACCAGAGCA AATGGGCAAA CTGGAGTTAC TCACTTCTTT CGGCGTGGTT ACAGCCTTAC TTGCAAGCAT GGCAATGCAT GAAGCGTTGT ATCGTTTCGC CGGAGTGGAA AAAGACAAAG AAAAACAAGT GGCCATGCTT AACCACTTTT ATTCGTTGTC CATTACGATT GCTGCAGTGA TTGGTTTGAT ATTGCTGTTT ATCATCTTAG TCGCGCCGAT CCCTAGCCCA TTTTCTCAGT TGGAGTTCAT CGTGCTGATG CTCACAATTA TTCTGGAAGG CGCCATTGGT ATCGGTACAG CTTGGCTACG CATGCAAGAT GACAAAGCCA AAACATTGTT GTATGTGATG GTAACAACCA CTGCTCTTCA GGTGGTGTTC ATTGTTGCTG CTTTGATAAT TTATCCTCAC GTCATTTCTG TCTTGCTCGG TGGCTTATTG GCTGCCGTGA TTCAATTCAT CTGGTTACAC ATCGTCAATA AGTACAAGGT CGTTATACCT GACCTGACGT TGGCGATACA ACACCTGCAT TACTGCATTC CGGTCATGAT GTCGGCGCTA GTCGCTTTCT GTATTAACGG TGCTGAGCGT TGGTTTATTG GTGCTAATGC ATCACTGGCT ACGCTTGGTG TTTATGCGAT CGCGGTGAAG TTTGCTATTG GCATGTGTAT ATTGGTTCAA CCTTTTTGCA TGTGGTGGAT GCCGCGACGC TTCGCTTACT TGAAGCGGAG CCGTGGTGTG GAAGCGGTGA GAATTTCCCA TCTCGGTATA ATCTACATTG CAGTACTGAG TGTGCTTGCC GCGACACTTG CCTTCATTGT GATCAATCAT TTTTTGCCTG ATACGTATCA GCAAGCTGCA CTTTACACCC TCTTCCTCTT GCCGATAGCC ATGCTTAAAG AATGGAGTGA ACTACTGAAT ATCGCCATTT TATACAAACG CAGAACGCAT TGGTTATTAG GCATCAATAT TACCGCTGCA GGTATCGCTA TAACGTTACT CTTTGTACTT TCTTCCCTAG GTATTTATGG CGTATTTATT GCGCTTTACT ATGCACAATT GGCCAAGCTG GTCATGACGT TCATCATTGG GCAGCAATGC GTACACTTAC CATTCCAACT CAGTTTAATA GTCGCGTTAC ATATCATCTC TGGTCTGGCA CTGTTCCTGC TCCACTCTGC TCAATCCATC GGGGGAGCAA TCGCTATTTG CGTTTTGACG TGCGTACTGT TTGCAGGTGT CGCATTCAGA TTCATCCGCA GGAGTACACG CACCAATCTT GTAAATAAAC TAAGGGCTGA AGCAAAAAGA GTGTCGTTAT GA
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Protein sequence | MLKAMTNMSL FAVALVINKS ISLIMLPVLP QFLAPEQMGK LELLTSFGVV TALLASMAMH EALYRFAGVE KDKEKQVAML NHFYSLSITI AAVIGLILLF IILVAPIPSP FSQLEFIVLM LTIILEGAIG IGTAWLRMQD DKAKTLLYVM VTTTALQVVF IVAALIIYPH VISVLLGGLL AAVIQFIWLH IVNKYKVVIP DLTLAIQHLH YCIPVMMSAL VAFCINGAER WFIGANASLA TLGVYAIAVK FAIGMCILVQ PFCMWWMPRR FAYLKRSRGV EAVRISHLGI IYIAVLSVLA ATLAFIVINH FLPDTYQQAA LYTLFLLPIA MLKEWSELLN IAILYKRRTH WLLGINITAA GIAITLLFVL SSLGIYGVFI ALYYAQLAKL VMTFIIGQQC VHLPFQLSLI VALHIISGLA LFLLHSAQSI GGAIAICVLT CVLFAGVAFR FIRRSTRTNL VNKLRAEAKR VSL
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