Gene VIBHAR_02219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02219 
Symbol 
ID5554242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2216845 
End bp2218041 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content45% 
IMG OID640907706 
Producthypothetical protein 
Protein accessionYP_001445409 
Protein GI156974502 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATC TACTTTGGAC AATCGGCTTC GTTTTGTCTG CGCTACTGAT CATTTATCAT 
CACGTCGGTT ACCCGTTGGT TTTAAATTGG CTATCCGCTC GTCGCAAGCA ACGTCAAACG
TCAAAAAACA TTGGGAAAGA ACGTTGTTAT AAAGCTTCAA AAGCCGACTG TACACTTCCG
ACGATGACGG TGATCGTCCC AGCGTACAAT GAAGAGCAAT GGATTGCAGA AAAGATTCGT
AACCTCGCGA GCTTAGACTA CCCCAGAGAT AAGCTGACCA TCATCGTCGC CTGTGATGGT
TGTACCGATA ACACCGTGGA GATCGCACAG GGCACCATCC AAGAAGCGAT TTGCGCAGAT
ACCTTGTTCA TCGTGCACGA CCATAAAAAT AACCGTGGTA AAGTGAACTT GATCAATACA
GAGATGGAAA ATGTTACCTC TGAGATTACT GCCCTAAGTG ACGTATCAGC TCTCGTATCT
TGCGATTCGC TCTTACTTGC CAGCCAGCAC TATCAAAACG AGAAAGTTGG TGTGGTCAAT
GCCACTTACC AAATTATGTC TAGCCAAAAT CAAGGTGAAG CGGCTTATTG GCGTTATCAA
TCTAAAGTGA AATTCAAAGA GTCATTGATC GGCTCGACCA TTGGATCTCA CGGCGCGTTT
TACACATTTA GAACTAGCCT ATTCGCACCA TTAGAGCCAG AGATCATCAA CGATGACTTT
ATCTTACCAA TGCGTATCGT GCTTCAGGGC TATGCCTCTG TCTATGAACC AAAGATGCTC
GCGATTGAGT TAGAGGAAAG CTCCGATGAT TCTGACTTCA AACGTCGCCT ACGTATCTCC
GCAGGCAATA TGCAGCAGTT CTTGAAGCTG AAAAGGTTGC TACTACCTCG TTACCGTGGC
ACCGCATTTG CATTTTTGTC AGGAAAGGTT CTGCGTCTCG CGACCCCTTA CTTAATGATT
ATGTGCCTGA CGAGTTCTAT TTTGCTCATT GAGCACCCCA CTTTCCAACT TCTGTTAACC
GGACAGTTGG CCGTCTACTT AGTGGCGTTT ATCACTTACT TAATACCAGC ATTCAATTTG
TTTAAGCCGT TCAAGTTGAT CAACTACATG GTGGTTGGAC ACATAGCAAA CTTTGCAGGC
GGACTGCGTT ACCTACTTGG TATGGAAAAT GGTCGCTGGA AGCGCGTTAA TCATTAA
 
Protein sequence
MIDLLWTIGF VLSALLIIYH HVGYPLVLNW LSARRKQRQT SKNIGKERCY KASKADCTLP 
TMTVIVPAYN EEQWIAEKIR NLASLDYPRD KLTIIVACDG CTDNTVEIAQ GTIQEAICAD
TLFIVHDHKN NRGKVNLINT EMENVTSEIT ALSDVSALVS CDSLLLASQH YQNEKVGVVN
ATYQIMSSQN QGEAAYWRYQ SKVKFKESLI GSTIGSHGAF YTFRTSLFAP LEPEIINDDF
ILPMRIVLQG YASVYEPKML AIELEESSDD SDFKRRLRIS AGNMQQFLKL KRLLLPRYRG
TAFAFLSGKV LRLATPYLMI MCLTSSILLI EHPTFQLLLT GQLAVYLVAF ITYLIPAFNL
FKPFKLINYM VVGHIANFAG GLRYLLGMEN GRWKRVNH