Gene VIBHAR_02218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02218 
Symbol 
ID5556220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2216196 
End bp2216873 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content46% 
IMG OID640907705 
Producthypothetical protein 
Protein accessionYP_001445408 
Protein GI156974501 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGCTG GAAGCGCGTT AATCATTAAG GAAAACACAA TGAAAATTTC ACGCTACGAC 
TCAAATATTC ATTTAGCAAA ACGCGCTTTC GACGTCGTTA TCTCACTACT CATCTTGCTG 
GCGACGATGC CGCTTATGCC TATGATTGCG CTTGTCATTG TGGTCAATTC AAAAGGCCCA 
GTCATTTATC GTCAACTTCG TGTTGGTCGC TGCACACCAG AGAAAATGGA CTTGTTCGAA 
ATTATGAAGT TTCGCACCAT GTACATCGAT GCTGAACAGC GCTCAGGAGC GGTGTGGGCC 
AGCGAAAATG ACCCTCGAAT AACTCCCGTT GGCCGATTCC TACGCAAGAC TCGCCTGGAT 
GAACTCCCTC AACTATTTAA TGTTCTTAAG GGGGAAATGT CTCTGATTGG CCCTCGTCCA 
GAGCGCCCTG CTTTCTATCA AAAGCTAGAA GATGAAATTC CTTATTTTGT TGAACGTACC 
TACGGCGTAT TACCGGGTAT CACTGGCTTA GCGCAAGTTA ACCAAGGTTA TGACTCGTCT 
ATTGAGGACG TTCGCCGCAA AGTGGGCTAC GACCACAGCT ATGCATTGAG TCTAAGTTCT 
TTTAATTCTT GGATTTCGAT GGATATTTCG ATCATGAGCA AAACGCTCGT CGTCATGATC 
GACGGTCGAG GTCAGTAA
 
Protein sequence
MVAGSALIIK ENTMKISRYD SNIHLAKRAF DVVISLLILL ATMPLMPMIA LVIVVNSKGP 
VIYRQLRVGR CTPEKMDLFE IMKFRTMYID AEQRSGAVWA SENDPRITPV GRFLRKTRLD 
ELPQLFNVLK GEMSLIGPRP ERPAFYQKLE DEIPYFVERT YGVLPGITGL AQVNQGYDSS 
IEDVRRKVGY DHSYALSLSS FNSWISMDIS IMSKTLVVMI DGRGQ