Gene VIBHAR_02197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02197 
Symbol 
ID5555347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2195656 
End bp2197128 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content44% 
IMG OID640907684 
Producthypothetical protein 
Protein accessionYP_001445387 
Protein GI156974480 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAACC TGTATCACAT CGCCGCCTAT ACGCTATTTT TGAACAATAA GTTTCTAGAT 
TGCTGGATTA AACCAGTGCA AAACAAGGAG ATGGGGAGTA GGATTAGCGG CTTTCTAACG
CCAGTTGCCT GCCTTTTCTT GATAAGTTCT CACTCTTTTG ATTCAGGCTA CATTTTAGAG
GATGACATTT TGCTCGATCA TCACATTCGC ACCTTCATTT CTGAAAAGCT CAGTGCTGTC
GGTATTAACA GCGACCCATA TGGCATTGAA CTCACCACCG TATTTATCCT AGCAAGCCTC
ACCGCGGCAG CAGTCAGTTA TTTGATCGTG CATCACTTGA TTGTTCGCTC AGTGAATAAC
GTGCTGCAGA AAGCCAACAA ACCGCTCGCT GAAAGTTTGG CGAAATACGA TGTATTAGAG
AAACTGTCGC TGCTTATCCC AATTATGGTA CTGGATGTGT TCATTCCCCT TGCAGTAGGC
CACTATGATT GGTTGGCTGC TATCTTCGAT AGGATTTTGA GCATTTCGAT TTTGGTCATC
TTTGTATGGA TGATCTTCGC CCTACTCGAC GCAATGAATG ACATCGCGAC GTTTAAAGGC
ATAACAAAAA AAATGCCGAT CAAGAGCTTT GTTCAGTTGA TTAAGCTGTT CACCTTCTTT
GTTGGCGTCG TGGTGTCTAT GTCCATTCTC GCCAATGAGT CCCCGGTCAT TTTCTTGTCT
GGATTAGGTG TCGCGACTGG TTTCGTGATG CTGGTGTTTA AAGACACAAT ATTGGGCTTC
GTTGCTGGCA TTCAGCTTTC TGCAAACCGC ATGATCAGCT TGAACGATTG GATTCAAATG
GACGCTTATG GAGCAAATGG CACGGTAGAA GAAATCTCTT TAACCACGGT GAAAGTCAGA
AACTTTGACA ACACCGTGAG CATGCTGCCT GCTTATGCTC TGGTTCAGAA CGCATTTATC
AACTGGCAAG GCATGTCAGA TTCAGGTGGT CGCCGTATCA AGCGCTCCGT AAATGTTGAC
GTCACATCGA TTCGTTTCTT ATCTGATGCA GAAGTTGAAA AGCTGAAAAG CATTCGAATC
TTGCGCCAAT ACATCTATGA AAAATCGCGA GACATCAACG AATACAATGA GGAAATGAGC
GACGAACCAA CTTTTGGCAA CCTTCGTCAG ATGACCAATT TGGGTATGTT TCGAGCTTAT
ATTAATGCCT ATTTGAAAGC GAACAAAGAC ATCCACCAAT ACATGCTTAT CATGGTGAGA
CAGCTAGAAC CGACGCCAGA GGGTATTCCA CTTCAAGTTT ACGCCTTTAC GAACAATACA
GACTGGGCTT ACTATGAAGG CGTACAAGCA GATTTATTCG ATCACATCTA CTCTATTATG
CCCTTGTTTG GTTTACGCCC TTACCAGATG TTCACGAGTC ACGATGCCAG ACAGATTGGA
CTGGAACAGG TCACCAGTAA AAACGCTCAG TAG
 
Protein sequence
MLNLYHIAAY TLFLNNKFLD CWIKPVQNKE MGSRISGFLT PVACLFLISS HSFDSGYILE 
DDILLDHHIR TFISEKLSAV GINSDPYGIE LTTVFILASL TAAAVSYLIV HHLIVRSVNN
VLQKANKPLA ESLAKYDVLE KLSLLIPIMV LDVFIPLAVG HYDWLAAIFD RILSISILVI
FVWMIFALLD AMNDIATFKG ITKKMPIKSF VQLIKLFTFF VGVVVSMSIL ANESPVIFLS
GLGVATGFVM LVFKDTILGF VAGIQLSANR MISLNDWIQM DAYGANGTVE EISLTTVKVR
NFDNTVSMLP AYALVQNAFI NWQGMSDSGG RRIKRSVNVD VTSIRFLSDA EVEKLKSIRI
LRQYIYEKSR DINEYNEEMS DEPTFGNLRQ MTNLGMFRAY INAYLKANKD IHQYMLIMVR
QLEPTPEGIP LQVYAFTNNT DWAYYEGVQA DLFDHIYSIM PLFGLRPYQM FTSHDARQIG
LEQVTSKNAQ