Gene VIBHAR_02178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02178 
Symbol 
ID5555806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp2176825 
End bp2177955 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content50% 
IMG OID640907665 
Producthypothetical protein 
Protein accessionYP_001445370 
Protein GI156974463 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3508] Homogentisate 1,2-dioxygenase 
TIGRFAM ID[TIGR01015] homogentisate 1,2-dioxygenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAT GGATCACATT CCCTCATCGG GAGGGAGTGT GCTCCAAGCA AGCACATGCT 
GATTTCCCGG AAGAGGCAAT TTACGAACGT GAAGCAGGTC GAAGCGGTTT CTTCGGCCCT 
GCGGCACACT TTCATCATCA ACACGCACCG ACAGGTTGGT TGGAGTGGGA AGGCGATTTA 
CGTCCGCGCG CTTTCGATTT CAACCTAGTC GAAACGGCGA GTCAGATTTC GCCTTGGGCA 
GTGCCGCATC TGCTACACAA CGCCAACTGT AAGATCCGTG TATGGCGTAT GGACGAAAAG 
ATGGACTTCT TGGTGCGTAA CGCCGATGGC GATGAGCTAC TGTTCATCCA TCACGGTACA 
GCAGACCTTT ATTGCGACTA TGGTCATCTC AAAGTGAGCG AAGGTGATTA CGTAATGATT 
CCACGCTCAA CCAGTTGGCG ATTAGAACCA AGTGAGCCAA TGTTTGTTCT GATGATTGAA 
AACACCGATG CCGCTTATTC TTTGCCAGAG AAAGGCATGG TGGGTAATCA TGCTGTATTT 
GACCCGGCGG TTCTGGACAC GCCTTCCATT AACGACGAAT TCCGCGCGCA ATACTCAGAA 
GATCAAACTC AAGTTCATGT GAAGCGTCAT GACAAAGTCA GCGTGATTAC TTACCCATTC 
AACCCGCTTG ATGCGATTGG CTGGCACGGT GACTTGGCAG TGGTGAAAGT GAACTGGCGT 
GATATTCGAC CTTTGATGTC GCATCGCTAT CACTTACCAC CTTCTGCCCA CACTACATTT 
GTTGGTGCTG GATTTGTGGT GTGTACGTTT GTGCCACGTC CAATCGAGAG CGACCCTGGC 
GCACTGAAGG TGCCGTTCTA TCATAACAAT GACGATTATG ACGAAGTCTT GTTCTACCAC 
GCAGGGGATT TCTTCAGCCG TGACAACATA GAAGCAGGCA TGGTGACTTT CCACCCAGCA 
GGTTTTACCC ACGGTCCTCA CCCGAAAGCG TTCAAAGCAG GGCAGGAATA TAAGAAGAAG 
TTTACCGATG AGGTGGCAGT GATGATTGAT ACGCGCCACG CACTCGAGTT TTCTGACGAG 
CTCGATAAGG TTGAAAACAA AGAATACGTC TATAGCTGGC AAGAGAAGTA A
 
Protein sequence
MHKWITFPHR EGVCSKQAHA DFPEEAIYER EAGRSGFFGP AAHFHHQHAP TGWLEWEGDL 
RPRAFDFNLV ETASQISPWA VPHLLHNANC KIRVWRMDEK MDFLVRNADG DELLFIHHGT 
ADLYCDYGHL KVSEGDYVMI PRSTSWRLEP SEPMFVLMIE NTDAAYSLPE KGMVGNHAVF 
DPAVLDTPSI NDEFRAQYSE DQTQVHVKRH DKVSVITYPF NPLDAIGWHG DLAVVKVNWR 
DIRPLMSHRY HLPPSAHTTF VGAGFVVCTF VPRPIESDPG ALKVPFYHNN DDYDEVLFYH 
AGDFFSRDNI EAGMVTFHPA GFTHGPHPKA FKAGQEYKKK FTDEVAVMID TRHALEFSDE 
LDKVENKEYV YSWQEK