Gene VIBHAR_02131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02131 
Symbol 
ID5554743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp2135542 
End bp2136570 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content46% 
IMG OID640907618 
Productsuccinylglutamate desuccinylase 
Protein accessionYP_001445323 
Protein GI156974416 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2988] Succinylglutamate desuccinylase 
TIGRFAM ID[TIGR03242] succinylglutamate desuccinylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAGT CTCTCTTTCG CCAATCGTTT TTAACTGACA CGTTAGATGT TCATATTGAT 
GTCGCGCCAG CGGAGCAGGT GCTGTCTAAT GGTGTAAAAC TTAAACTCTA TCAGCGTGGT 
GTGCTAGAAG TGATTCCTGA AGAATACACT CAGGAAACAA AGAACGTCAT CATCTCTTGT 
GGTGTCCACG GGGATGAAAC CGCACCGATG GAGCTGGTGG ATTCAATTAT CAAAGACATC 
GAATCCGGCT TCCAAAAGGT CGAGGCTCGA TGCCTATTCA TTATCGCTCA CCCAGAATCG 
ACTCTGGCTC ACTCGCGATT TTTAGAAGAA AACCTTAATC GACTGTTTGA TGAGAAAGAG 
CACGAGCCAA CCAAAGAGCT TGCGATTGCT GACACTCTCA AATTGTTAGT CAGAGATTTC 
TATCAAGATA CGGCAGCGGA AACACGCTGG CACTTAGATT TGCACTGTGC GATCCGTGCT 
TCAAAGCACT ACACCTTTGC GGTGAGTCCG AAAACGCGTC ATCCTGTTCG TAGCAAAGCT 
TTGATTGATT TTCTCGACAG TGCACATATT GAAGCCGTGC TACTGTCTAA CTCACCAACC 
AGCACATTCA GTTGGTTCAG TGCAGAGAAC TACGGCGCTC AAGCTTTGAC GATGGAACTG 
GGTCGTGTGG CTCGCATTGG TGAAAACGAC TTAGACAAAT TGACTGCGTT CGATTTGTCA 
CTGCGTAACC TAATTGCAGA GTCGAAAGCG GAGCACTTGT CTAAGCCATG TATCAAGTAC 
CGTGTTAGTC GTACGATTGT GCGTTTGCAC GAAGATTTTG ATTTCATGTT TGATGACAAC 
GTCGAGAACT TCACATCATT CGTTCACGGC GAAGTGTTTG GTCACGATGG TGACAAACCT 
CTGATGGCGA AGAACGATAA CGAAGCCGTT GTTTTCCCAA ATCGCCACGT CGCGATTGGT 
CAACGCGCAG CATTAATGGT GTGTGAAGTG AAAACGCGTT ACGAAGATGG CGAGTTAGTC 
TACGATTAA
 
Protein sequence
MTKSLFRQSF LTDTLDVHID VAPAEQVLSN GVKLKLYQRG VLEVIPEEYT QETKNVIISC 
GVHGDETAPM ELVDSIIKDI ESGFQKVEAR CLFIIAHPES TLAHSRFLEE NLNRLFDEKE 
HEPTKELAIA DTLKLLVRDF YQDTAAETRW HLDLHCAIRA SKHYTFAVSP KTRHPVRSKA 
LIDFLDSAHI EAVLLSNSPT STFSWFSAEN YGAQALTMEL GRVARIGEND LDKLTAFDLS 
LRNLIAESKA EHLSKPCIKY RVSRTIVRLH EDFDFMFDDN VENFTSFVHG EVFGHDGDKP 
LMAKNDNEAV VFPNRHVAIG QRAALMVCEV KTRYEDGELV YD