Gene VIBHAR_02126 details

Gene Information

• Locus tag: VIBHAR_02126
• Symbol: cobT
• ID: 5554662
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 2130416
• End bp: 2131459
• Gene Length: 1044 bp
• Protein Length: 347 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640907613
• Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
• Protein accession: YP_001445318
• Protein GI: 156974411
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2038] NaMN:DMB phosphoribosyltransferase
• TIGRFAM ID: [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCGCT CTTTTGCCTC AGAAATTCAA GCTCGCATTG ATAACAAAAC CAAACCATTA 
GGCGCTCTTG GTTTGCTCGA AAAAGTGGCG CTAGAACTGG CGTTAATTCA AAGCCAAGAC 
AAGCTTCAAT CGGTTGAAAC AATAGAAATT CGCAAACCAA CCATGTTGGT ATTCGCTGGT 
GATCATGGTA TCGCGAAAGA AGGGGTGAGC ATTGCACCAA GCGCCGTGAC TCAGCAAATG 
GTGGCGAATT TTCTCGCTGG TGGCGCCGCC ATTAATTGTT TCTGCGATCT CAACCAAATT 
GACTTTAAGG TTGTTGACTG TGGCATGTTG TCACCGATCG ATACCTTAGT TCCTGACTTT 
AAACATCATC CCAACTTGAT TGAAAGACGT CTGGGAAATG GTACGGCAAA CTTTGCTAAA 
CAAACGGCGA TGTCGTTAGA ACAAGTCGCG CTAGGTTTGG AATATGGTGC CAAGGTCGCG 
CAGCAGGCGA TTCTTAATGG CTCGAACTTG TTGATGTTTG GTGAGATGGG GATTGGCAAT 
ACCAGTTCTG CATCGGCATT GTTAACTGCT CTGAGTCTAT TGGAAGTCGA CCATTGTGTT 
GGCTATGGCA CGGGCATTAC TCAAGAGCAA CTCAACCGCA AGATCAAGCT AGTCGCGCAA 
GGTGTGAATC GCTGCCATGA CCTTGACACC AAAGGTGCGT TGGCTCAAGT CGGTGGGTTT 
GAAATCGTGC AAATGGTTGG CGCATTCTTA GAAGCAAAAC GCCACAAAAC GCCAGTCTTG 
GTTGATGGAT TTATCGTATC TGTAGCTGCT TATGTCGCGA CTCTATTAGA TGAAGAGACG 
CGAGATTACA TGTTATTTGC TCATAACTCA GAAGAGAATG GGCATAAGTT TGTGCTGGAA 
TGCCTACAAG CGGAGCCTCT TTTGGATCTT GGCTTGCGTC TAGGTGAAGG AACCGGAGCA 
GCGCTTGCTT TGCCACTGGT AAAAGCGGCG GCTCAGTTTT ACAACAACAT GGCAAGTTTT 
GAGAGTGCGG GAGTGACGGT TTAG 

 

Protein sequence

MDRSFASEIQ ARIDNKTKPL GALGLLEKVA LELALIQSQD KLQSVETIEI RKPTMLVFAG 
DHGIAKEGVS IAPSAVTQQM VANFLAGGAA INCFCDLNQI DFKVVDCGML SPIDTLVPDF 
KHHPNLIERR LGNGTANFAK QTAMSLEQVA LGLEYGAKVA QQAILNGSNL LMFGEMGIGN 
TSSASALLTA LSLLEVDHCV GYGTGITQEQ LNRKIKLVAQ GVNRCHDLDT KGALAQVGGF 
EIVQMVGAFL EAKRHKTPVL VDGFIVSVAA YVATLLDEET RDYMLFAHNS EENGHKFVLE 
CLQAEPLLDL GLRLGEGTGA ALALPLVKAA AQFYNNMASF ESAGVTV