Gene VIBHAR_02122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02122 
Symbol 
ID5554620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2126857 
End bp2128230 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content47% 
IMG OID640907609 
Producthypothetical protein 
Protein accessionYP_001445314 
Protein GI156974407 
COG category[R] General function prediction only 
COG ID[COG1823] Predicted Na+/dicarboxylate symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTCG CAGTGGTTGC CTCTCTGGCG GTGTTTATCG CCATATTATT CTTTCTTTTT 
AATCAGCAAC AAAAACAGAA CACCTTGTCT CGTCTTGTGT TGATTGGTTT AGTGACTGGT
TCACTTTTCG GTCTTGCTCT ACAACTGATT CATGGTGAAG GCAGTGATGT GATTGCTCAA
ACGCTTGAGT GGGTTGGCAT CGTCGGCAGT GGTTACGTTG GCCTGTTGAA GATGGTCATC
ATGCCATTGG TACTGGTCTC CATGATTTCT GCTGTAGTAA AACTTGAGAA AGGCGGGTCA
CTAGGCAAAA TTTCTGGCAT CACAATTTCA GTTTTATTGG TCACGACAGC CATTGCTGCC
ATCATTGGTA TCCTCGTAAC AACGACATTT GGCCTTTCTG CTGAAGGTCT TACTGAAGGT
GCGCGTGAAA CGGCTCGTAT TGCTGTATTA GAGAGTCGTG CAGGCTCAGT GAGTGATCTA
ACGATTCCTC AAATGTTGGT CAGCTTTATC CCAACCAATC CGTTTGCTGA TTTAACTGGC
GCTCGTTCGA CCTCAATTAT TGCTGTGGTT ATTTTTGGTG TTTTGGTTGG TATCGCTGCA
CGTAAAGTGA TGGCGGAAAA AGAAGAGCTA GAATCACCAA TCCGCACTTT TGTCGAAGCG
GCTCAATCTA TCGTTATGCG TCTGGTTAAG ATGATCATGG CATTGACGCC TTACGGCATT
GCAGCCCTAA TGGCGAAAGT TGTGGCGACC TCAAGCGCTG GCGACATTCT TAACCTGCTG
GGTTTCATTG TTGCCTCCTA CGTAGCGATT GCACTGATGT TCCTTGTGCA CGGTCTACTT
GTGTCTTTCG TTGGTGTTAG CCCTGCTGAG TACTTTAAGA AGATTTGGCC AGTACTGACG
TTTGCCTTCA CATCACGCAG CTCAGCGGCA ACCATCCCGC TTAATGTAGA AGCACAAATC
ACAAAGTTAA ACGTACCACC AGCGATTGCG AACTTGTCAG CGTCTTTCGG TGCCACTATA
GGCCAGAACG GCTGTGCAGG TATCTACCCA GCAATGCTTG CGGTAATGGT AGCGCCAACA
ATGGGTATCG ATCCTCTAGA CATCAACTTT ATTCTGTCAC TAATTGCTAT CATCACGATT
AGCTCATTTG GTATTGCCGG TGTGGGCGGC GGCGCAACCT TTGCAGCCCT GATTGTACTA
CCTGCGATGG GCTTGCCTGT GACAATTGCA GCACTGCTTA TCTCTATCGA ACCATTGATC
GATATGGCGC GTACCGCATT GAATGTCTCT GGCGCTATGA CAGCCGGCAC CATTACCAGC
CGCGTGTTAA AGTCGACCAA TAGCGAAACT ACGTTGGAAG AACAGAAAGC GTAA
 
Protein sequence
MNFAVVASLA VFIAILFFLF NQQQKQNTLS RLVLIGLVTG SLFGLALQLI HGEGSDVIAQ 
TLEWVGIVGS GYVGLLKMVI MPLVLVSMIS AVVKLEKGGS LGKISGITIS VLLVTTAIAA
IIGILVTTTF GLSAEGLTEG ARETARIAVL ESRAGSVSDL TIPQMLVSFI PTNPFADLTG
ARSTSIIAVV IFGVLVGIAA RKVMAEKEEL ESPIRTFVEA AQSIVMRLVK MIMALTPYGI
AALMAKVVAT SSAGDILNLL GFIVASYVAI ALMFLVHGLL VSFVGVSPAE YFKKIWPVLT
FAFTSRSSAA TIPLNVEAQI TKLNVPPAIA NLSASFGATI GQNGCAGIYP AMLAVMVAPT
MGIDPLDINF ILSLIAIITI SSFGIAGVGG GATFAALIVL PAMGLPVTIA ALLISIEPLI
DMARTALNVS GAMTAGTITS RVLKSTNSET TLEEQKA