| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_02116 |
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| Symbol | |
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| ID | 5554554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 2122102 |
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| End bp | 2122989 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640907603 |
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| Product | cytidine deaminase |
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| Protein accession | YP_001445308 |
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| Protein GI | 156974401 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTC GCATTGAACA GGCGCTAGCA AGCGCTCCTG AAGCACTTTC AACACATCTT
GCTCCTATCG TTTTAGCTGA CGATTTTGAT GCCACTATTT CTGAACAACA GTTTGGTGAA
CTGCTGAACG CGACCAACCT TTCAGACAAA GAGCTTCGTG TTGCTCTACT TCCTTTTGCC
GCAGCGTTTT CTTACGCTCC AATCTCTGAA TTCTATGTCG GTGCGATTGT TCGTGGCCTT
TCCGGTCGTC TTTACTTTGG CGCGAATATG GAGTTTTTCG GTGTTCAGCT AGGTCAAACC
GTTCATGCTG AGCAGTGCGC CATCAGCCAT GCTTGGATGA AAGGCGAACA TGGTGTGAAA
GACATCACTA TCAACTACAG CCCTTGCGGC CACTGCCGTC AGTTCATGAA CGAGCTAAGC
ACAGCAAAAG AATTAAAGAT CCAGTTACCA GAACGTCAAG AAAAGTCACT TCATCACTAC
CTTCCGGAAG CGTTTGGTCC GGCGGATCTA GGTATTGAGT CTGGTCTTAT GGCTGAGGTG
AAGCACGAGT TTGTTTGTGA TGAAGACGAT GCTTTAATCC AAAAAGCCGT CAATGCGATG
AACATTAGCC ACGCGCCATA CACAAACAAC TTGAGTGGTA TTGCGCTTGA GATGAACAGT
GGCCTTGTAT TCCAAGGCGC GTACGCAGAA AACGCCGCAT TCAACCCTAG CCTTCCACCA
CTGCAGGTTG CATTAATTCA AATCCTGATG GCTGGTGAGA AGTTTGAAGA CATCAAAGCT
GCTGCGTTAG TTGAAAACTC ACAAGGTAAG ATCAGCCACC TAGCTGATAC TCAATCGACG
CTAGAAGCAC TAAATCCTGA TATTCCAGTG AGCTTTGTTA ACGTTTAA
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| Protein sequence | MKSRIEQALA SAPEALSTHL APIVLADDFD ATISEQQFGE LLNATNLSDK ELRVALLPFA
AAFSYAPISE FYVGAIVRGL SGRLYFGANM EFFGVQLGQT VHAEQCAISH AWMKGEHGVK
DITINYSPCG HCRQFMNELS TAKELKIQLP ERQEKSLHHY LPEAFGPADL GIESGLMAEV
KHEFVCDEDD ALIQKAVNAM NISHAPYTNN LSGIALEMNS GLVFQGAYAE NAAFNPSLPP
LQVALIQILM AGEKFEDIKA AALVENSQGK ISHLADTQST LEALNPDIPV SFVNV
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