Gene VIBHAR_02060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02060 
Symbol 
ID5556356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp2052407 
End bp2053066 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content51% 
IMG OID640907547 
Producthypothetical protein 
Protein accessionYP_001445252 
Protein GI156974345 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTG CACTTGCGCT AGTGCTGGCT CTTACAGGCT GTCAAGCAAC ACAGCGCCAA 
AACGCAACCA CAGGTGAATA CGAAACTAAC TCAACCACGC AAGGTGCGCT CATCGGTGCG 
ATCGCAGGTG CGGCAATTGG CCTAGCTGTG GGTGATAACG CAAAAGAACG CCGTAAAGGT 
GCTTTGATTG GTGCAGCTGC TGGCGGTGCA ACAGGCGCTG GTGTTGGCTA CTACTTCGAC 
CAACAAGAAG CGGAACTGCG TCGTGCCCTA CTAAACTCTG GCGTACAAGT TGAACGTGTT 
GGCGAAAACC AACTGCTTCT TCGCATGGAA AACGGCATTG GTTTCTCTTC AAGCTCTTAC 
CAACTTGATT CAAGCATCCA CAACACACTG CGTGGCGTGG CTCGTATCCT AGTTGAATAC 
CCAGACACAA GCCTTGTGAT CGATGGTTAC ACAGACAGCA CGGGCAGCGA TTCTTACAAC 
CAAACGCTAT CTGAGCGCCG TGCTGAATCT GTACGTCAGT ACCTAGTGTC ACAAAAAGTT 
GCTCCAGGTC GCGCAATTGC ACGTGGCTAC GGTGAGCGCA ACCCAATTTG TTCAAACCAA 
ACTTCAGATG GTCGTGCTTG CAACCGTCGT GTTGAAATCC AGATCTTGCC ACTGAAGTAA
 
Protein sequence
MSIALALVLA LTGCQATQRQ NATTGEYETN STTQGALIGA IAGAAIGLAV GDNAKERRKG 
ALIGAAAGGA TGAGVGYYFD QQEAELRRAL LNSGVQVERV GENQLLLRME NGIGFSSSSY 
QLDSSIHNTL RGVARILVEY PDTSLVIDGY TDSTGSDSYN QTLSERRAES VRQYLVSQKV 
APGRAIARGY GERNPICSNQ TSDGRACNRR VEIQILPLK