Gene VIBHAR_02003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02003 
Symbol 
ID5552915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1995702 
End bp1996658 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content43% 
IMG OID640907490 
Productintegrase 
Protein accessionYP_001445195 
Protein GI156974288 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02249] integron integrase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTC AGTTTTTACT TGGCGTCAAA GAGCATATGA TCTCGCGTCA CTATGCGAAG 
AAAACTATTG AAACCTACCT GTTTTGGATC AAGCGTTACA TTGTCTTCCA CCAGCTAACT 
CACCCTTCCA AACTTTGTGA AGACGATGTT GAACGCTTTC TAAGTCATCT TGCCATTGAT 
GAAAAGGTAG CAGTGAAAAC GCAGGCACTT GCATTAAACG CCATCTCATT TTTATATCGA 
GAGTACTTCC AGATGCCACT TTCATTGAAT ATGAGATTTC AAAAATCACT CACTGAGAAA 
AAACTGCCCG TTGTTTTAAC AAGAGACGAA GTGAGACGCT TTGTTCAGCA TATTGACCCC 
AAATACAAAC TCCATATCCA ACTATTGTAT GGTTCTGGCC TGCGAATCAT GGAATGCTTA 
CGACTAAGAA TTCAAGATAT TGATTACGAC TACGGTGCGC TTAGAGTCTG GCAGGGAAAA 
GGTGGTAAGA ATAGAACGGT CACATTAGCG AAAGAGCTAC ATGAACCACT AAAAGCACAG 
GTCAACCTAA CGAGAGATTA TTACCAGAAG GACCGTCATA TGGGCGGTTA TGCTGGTGTT 
TATATCTCTG ATGGACTTCG AAGGAAGTAC CCTGGCGCAG AATTGGATTT CAACTGGCAC 
TTTCTCTTCC CATCAACCAA ATTAAGTATA GATGCAGATA CTGGTGAGTT TAGGCGGCAT 
CATGTCAATG AGAGTGCGAT ACAAAGGGCT GTCAAACGAG CGGCAAAAGA CGCGGGAATA 
GAAAAGTCTG TCACTTGCCA TACGCTTAGG CACAGCTTTG CTACCCACCT TCTTGAGACA 
GGAGCCGACA TAAGAACCGT CCAGGAGCAA CTTGGGCATA CCGATGTGAA AACGACTCAA 
ATCTACACTG CAGTTCATCA TGTCAACCAC AAAAATGATC CATCATTGGT GGATTGA
 
Protein sequence
MKSQFLLGVK EHMISRHYAK KTIETYLFWI KRYIVFHQLT HPSKLCEDDV ERFLSHLAID 
EKVAVKTQAL ALNAISFLYR EYFQMPLSLN MRFQKSLTEK KLPVVLTRDE VRRFVQHIDP 
KYKLHIQLLY GSGLRIMECL RLRIQDIDYD YGALRVWQGK GGKNRTVTLA KELHEPLKAQ 
VNLTRDYYQK DRHMGGYAGV YISDGLRRKY PGAELDFNWH FLFPSTKLSI DADTGEFRRH 
HVNESAIQRA VKRAAKDAGI EKSVTCHTLR HSFATHLLET GADIRTVQEQ LGHTDVKTTQ 
IYTAVHHVNH KNDPSLVD