Gene VIBHAR_01909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01909 
Symbol 
ID5553450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1918422 
End bp1919690 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content44% 
IMG OID640907396 
Producthypothetical protein 
Protein accessionYP_001445101 
Protein GI156974194 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACT CAAAAATGAA TACAACTACT TCTGCGGCTT CAACCGCACA ATCGTCTAGT 
AAGTTTACTT ACAAAGACTT CACCTGGTGT CTGTCTCTAT TCGGTACAGC AGTAGGTGCA
GGTGTACTAT TCCTCCCAAT TAAAGCAGGT GCTGGCGGTT TCTGGCCATT AGTTATCTTA
GCTCTAATCG CGGCACCAAT GACTTGGTTC GCACACAAAT CTCTAGCTCG TTTCGTACTT
TCTGCGAAAA ACCCTGAAGC GGATATCACT GACACAGTAG AAGAGCACTT CGGTAAAACT
GGCGCAAACC TTATTACTTT TGCCTACTTC TTCGCTATCT ACCCAATCGT ACTAATCTAC
GGTGTTGGTA TCACAAACAC GGTTGACTCT TTCCTAGTTA ACCAAATGGG TATGGAATCT
ATCCCTCGCT GGCTACTTTC TGGCGCGTTA ATCGCTGCTA TGACTGCGGG TGTAGTATTC
GGTAAAGAGC TAATGCTGAA AGCAACATCA GCAATGGTTT ACCCTCTAGT ATTCATCCTA
CTAGCACTTT CTTTCTACCT AATTCCTGAC TGGAATACAT CAATGATGGA AGTGTCTCCA
AACTGGGGCG AGATGCCTTC AATCGTTTGG CTAGCAATTC CAATCATCGT ATTCTCATTC
AACCACAGCC CAATCATCTC TCAGTTCTCT AAAGAACAAC GTCGTGTATA CGGTGATAAC
GCAGTTAAGA AAACTGACTC TATCACTGGT GGTGCAGCGA TTATGCTAAT GGGTTTTGTA
ATGTTCTTCG TATTCTCTGT AGTACTTTCT CTATCTCCAG AGCAACTAGC AACTGCGCAA
GAACAAAACA TCTCAGTACT GTCTTACCTA GCTAACGTTC ACGAGTCTCC ACTTATCTCT
TACATGGGTC CTCTAGTGGC GTTCGCAGCA ATCACTTCAA GCTACTTCGG TCACTTCCTA
GGCGCACACG AAGGTCTAGT TGGTCTAATC AAATCTCGCT CGGCATCTCC TAAGAGCAAG
ATCGAGAAAG CCTCACTAAT CTTCATCGTT GCGACTACTT GGATCGTTGC TATCGTTAAC
CCAAGCATCC TAGGCATGAT TGAAACAATG GGTGCACCGA TGATAGCTGC AATCCTATTC
TTGATGCCTG TATTCGCGAT GAACAAAGTT CCTGCGATGG CGAAGTACAA AACTTCAGCA
CCTGTACAGA TTTTCACAGC AATCTGTGGT CTTGCGGCAA TTAGTTCTGT AATCTACGGC
GCTCTTTAA
 
Protein sequence
MSNSKMNTTT SAASTAQSSS KFTYKDFTWC LSLFGTAVGA GVLFLPIKAG AGGFWPLVIL 
ALIAAPMTWF AHKSLARFVL SAKNPEADIT DTVEEHFGKT GANLITFAYF FAIYPIVLIY
GVGITNTVDS FLVNQMGMES IPRWLLSGAL IAAMTAGVVF GKELMLKATS AMVYPLVFIL
LALSFYLIPD WNTSMMEVSP NWGEMPSIVW LAIPIIVFSF NHSPIISQFS KEQRRVYGDN
AVKKTDSITG GAAIMLMGFV MFFVFSVVLS LSPEQLATAQ EQNISVLSYL ANVHESPLIS
YMGPLVAFAA ITSSYFGHFL GAHEGLVGLI KSRSASPKSK IEKASLIFIV ATTWIVAIVN
PSILGMIETM GAPMIAAILF LMPVFAMNKV PAMAKYKTSA PVQIFTAICG LAAISSVIYG
AL