| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01883 |
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| Symbol | |
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| ID | 5553524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 1895657 |
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| End bp | 1897246 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640907371 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001445076 |
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| Protein GI | 156974169 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGA GAGGAACAAT GACAAAAGGT ATAGATAAGT ACAGTATCGA CAGTACCGAC
TATACGGTTG GTCAAGACAA CGTCCAGAAA TGGGGGTTTG ACGTACATAA TCCTGTTTTT
GGTATCAGTG CTGGTTTCAT TGCACTATTT CTTGTCGCGG CGTTGGTGCT TGATGCACAT
ACTGCAAAAA CAGCGTTGGA TGGCATTAAG CTAAAAATCA TTAGCTCATT TGACTGGCTA
TTCATCCTTT CAGGCAACAT CTTCGTAATC TTCTGCCTAG CTTTGATTGT GTCACCAATG
GGTAAGATTC GCCTTGGCGG TAAAGACGCG GTAGCTGATT ACTCCTTTAT GTCTTGGCTT
GCGATGTTGT TTGCAGCAGG TATGGGTATC GGTCTGATGT TCTGGAGTGT GGCAGAGCCA
GTGGCTTACT TCACTGGTTG GTATGAAACC CCGCTAGGTG TAGAGGCAAA CACGCCGGAA
GCCGCTAAGC TTGCACTGGG CGCGACGATG TTCCACTGGG GTCTACACCC ATGGGCAATC
TACGGTGTCG TAGCACTTTC CCTTGCTTTC TTCACATACA ACAAAGGCTT GCCTCTATCG
ATGCGCTCGA TCTTCTACCC ATTGCTGGGC GATCGCGCAT GGGGTTGGGC TGGTCACATT
GTTGATATTC TAGCGGTACT AGCAACGCTA TTCGGTCTAG CTACGTCTCT AGGTCTAGGT
GCACAACAAG CGGCGAGTGG TATTCACCAC GTGTTCGGTG TTGAGCCAGG TCTTGGCTTG
CAAATCGTGG TAATCGCAGT AGTAACCCTG CTTGCAGTGG TATCGGTAAT CCGTGGTATT
GATGGCGGTG TAAAAGTCAT CAGTAACATC AACATGGTTA TCGCATTCTT GCTACTGATT
CTTGTTGGTT TGATTGGTTG GGCGGTAACG CTGGGCTCTA TCCCAACAAC GCTAATGGCT
TACCTAGAAA ACTTAGTGCC GCTAAGTAAC CCGTTTGGTC GTACTGACGA AGCATGGTTC
CAAGGTTGGA CTGTATTCTA CTGGGCTTGG TGGATTTCAT GGTCACCATT CGTAGGTATG
TTCATCGCGC GTGTATCACG TGGCCGTACG GTTCGTGAGT TCATTACTGC TGTTCTGATT
GTACCAACCG TCGTGACGCT GATCTGGATG TCAACATTTG GTGGTCTAGC AATCGACCAA
GTAATTAATA ATGTGGGTGA GCTAGGTGCG AACGGTCTTA CAGACGTTTC ATTAGCCATG
TTCCAAATGT TTGATGTTCT GCCATTTGGT AACATGCTGT CTATCATTGC CGTTGTGTTG
GTATTGGTAT TCTTCATCAC TTCATCGGAC TCTGGCTCAC TGGTTATCGA CAGCATTACA
GCTGGTGGTA AAGTGGATGC GCCTGTTCTA CAACGTGTAT TCTGGGCATT CATGGAAGGT
GCAATCGCGG TTGCGCTACT TTGGATTGGT GGCTCAGAAG CGGTTCAAGC GCTACAAGCT
GGTGCTATTT CGACAGCATT GCCATTCACG CTTGTATTGC TTGCAATGTG TGTCAGCCTA
TTGATGGGTA TGAGAACAGA GCGTCAATAA
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| Protein sequence | MQKRGTMTKG IDKYSIDSTD YTVGQDNVQK WGFDVHNPVF GISAGFIALF LVAALVLDAH
TAKTALDGIK LKIISSFDWL FILSGNIFVI FCLALIVSPM GKIRLGGKDA VADYSFMSWL
AMLFAAGMGI GLMFWSVAEP VAYFTGWYET PLGVEANTPE AAKLALGATM FHWGLHPWAI
YGVVALSLAF FTYNKGLPLS MRSIFYPLLG DRAWGWAGHI VDILAVLATL FGLATSLGLG
AQQAASGIHH VFGVEPGLGL QIVVIAVVTL LAVVSVIRGI DGGVKVISNI NMVIAFLLLI
LVGLIGWAVT LGSIPTTLMA YLENLVPLSN PFGRTDEAWF QGWTVFYWAW WISWSPFVGM
FIARVSRGRT VREFITAVLI VPTVVTLIWM STFGGLAIDQ VINNVGELGA NGLTDVSLAM
FQMFDVLPFG NMLSIIAVVL VLVFFITSSD SGSLVIDSIT AGGKVDAPVL QRVFWAFMEG
AIAVALLWIG GSEAVQALQA GAISTALPFT LVLLAMCVSL LMGMRTERQ
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