Gene VIBHAR_01880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01880 
Symbol 
ID5553840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1893021 
End bp1894064 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content43% 
IMG OID640907369 
Producthypothetical protein 
Protein accessionYP_001445074 
Protein GI156974167 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACGCA TCATGAAAAT TACACTGACT CCTCAACAGA AACTACAACT CGAACAAACA 
CACGATTCGA CTCGTGATGG TCGAGTGCGT GATCGCATTA AAGCAGTGTT GCTTGCTTCT 
GAAGGTTGGA GTCAGACCAT GATTGCTCAA GCTCTTCGTA TCCATGAATC GACTGTTGCA 
CGCCACCTCA GCGACTACGT TCTGTCTGAA AAACTGAAGC CTGAAAATGG TGGAAGTCAA 
AGCAAGCTTT CTGCCACTCA AACCATGCAG TTAATCGAGC ATTTGACTGA GAAAACCTAT 
TCCCACACCC ATCAAATTGT CGCCTACGTT AAAGAGACAT TTGGACTTGA TTACACGGTC 
TCAGGAATGA ACAAATGGCT TCACCACAAT GGTTTTAGCT ACAAGCAACC GAAAGGCGTT 
CCACACAAAT TTGATGAAGC AAAACAGCAA GCTTTCATCG AGGCTTATGA AGCGCTAAAG 
GCAAGCTGTG GCGAGGATGA ATCGATAGTC TTTATTGATG CAGTTCACCC AACATTATCA 
ACAAAAATAT CTCATGGCTG GATACGAACT GGTCAGGATA AAGTGATTGA AACAACAGGT 
AATCGTAGCC GATTGAACAT TATTGGTGCA CTGAACCTAT CGGATATCGG TGCAACCATT 
GTTCACGACT ATGAGAACAT TAACAGTGAA ACGATTGTTC GCTTTTTCTG TAAGTTAAGA 
GAGAGTTATC CGTTAACCCA TAAGCTTCAT ATCATCTTAG ATGGTGCGGG GTATCACCGC 
AGTGACTTAG TCAAAGATGC GGCGTTTGTC CTGAATATTG AACTGCATTA TCTTCCACCT 
TACAGCCCAA ACCTCAACCC AATAGAGCGG CTATGGAAAG TAATGAATGA GAAGTCGAGG 
AACAACGTTT ACTTCAAAAG AAAACGGGAC TTCAAGGAGG CAATAGACCA ATTTTTTGCA 
GTGACTCTTC CAGAGAGCGC AGGCTCTTTG GCATCTCGAA TTAATGATAA TTTTCAGATT 
CTCAAGCCTG CATCTTCAAG TTGA
 
Protein sequence
MLRIMKITLT PQQKLQLEQT HDSTRDGRVR DRIKAVLLAS EGWSQTMIAQ ALRIHESTVA 
RHLSDYVLSE KLKPENGGSQ SKLSATQTMQ LIEHLTEKTY SHTHQIVAYV KETFGLDYTV 
SGMNKWLHHN GFSYKQPKGV PHKFDEAKQQ AFIEAYEALK ASCGEDESIV FIDAVHPTLS 
TKISHGWIRT GQDKVIETTG NRSRLNIIGA LNLSDIGATI VHDYENINSE TIVRFFCKLR 
ESYPLTHKLH IILDGAGYHR SDLVKDAAFV LNIELHYLPP YSPNLNPIER LWKVMNEKSR 
NNVYFKRKRD FKEAIDQFFA VTLPESAGSL ASRINDNFQI LKPASSS